Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| endothelial cell | 5 studies | 22% ± 5% | |
| platelet | 5 studies | 21% ± 5% | |
| epithelial cell | 4 studies | 36% ± 16% | |
| fibroblast | 4 studies | 26% ± 9% | |
| ciliated cell | 3 studies | 31% ± 2% | |
| megakaryocyte | 3 studies | 31% ± 9% |
Insufficient scRNA-seq data for expression of SWI5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 732.64 | 1445 / 1445 | 100% | 17.76 | 183 / 183 |
| ovary | 100% | 1219.73 | 180 / 180 | 100% | 24.74 | 430 / 430 |
| thymus | 100% | 1371.90 | 653 / 653 | 100% | 48.31 | 605 / 605 |
| uterus | 100% | 1044.48 | 170 / 170 | 100% | 35.00 | 459 / 459 |
| brain | 100% | 708.20 | 2641 / 2642 | 100% | 26.32 | 705 / 705 |
| skin | 100% | 903.77 | 1808 / 1809 | 100% | 29.55 | 472 / 472 |
| kidney | 100% | 968.51 | 89 / 89 | 100% | 21.51 | 900 / 901 |
| liver | 100% | 683.48 | 226 / 226 | 100% | 22.76 | 405 / 406 |
| prostate | 100% | 1061.22 | 245 / 245 | 100% | 44.31 | 500 / 502 |
| adrenal gland | 100% | 786.91 | 258 / 258 | 100% | 29.52 | 229 / 230 |
| lung | 100% | 660.17 | 576 / 578 | 100% | 24.12 | 1152 / 1155 |
| stomach | 100% | 553.87 | 359 / 359 | 99% | 16.12 | 284 / 286 |
| breast | 100% | 894.03 | 459 / 459 | 99% | 30.45 | 1110 / 1118 |
| intestine | 100% | 642.95 | 966 / 966 | 99% | 18.24 | 523 / 527 |
| bladder | 100% | 831.86 | 21 / 21 | 99% | 27.45 | 497 / 504 |
| pancreas | 99% | 356.92 | 325 / 328 | 99% | 22.90 | 177 / 178 |
| adipose | 100% | 801.64 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 28.67 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 28.74 | 29 / 29 |
| spleen | 100% | 554.42 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 28.82 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 45.48 | 1 / 1 |
| blood vessel | 100% | 721.68 | 1333 / 1335 | 0% | 0 | 0 / 0 |
| heart | 99% | 657.83 | 854 / 861 | 0% | 0 | 0 / 0 |
| muscle | 98% | 440.17 | 787 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 81% | 292.27 | 749 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0000724 | Biological process | double-strand break repair via homologous recombination |
| GO_0071479 | Biological process | cellular response to ionizing radiation |
| GO_0034974 | Cellular component | Swi5-Swi2 complex |
| GO_0032798 | Cellular component | Swi5-Sfr1 complex |
| GO_0005634 | Cellular component | nucleus |
| GO_0005515 | Molecular function | protein binding |
| Gene name | SWI5 |
| Protein name | DNA repair protein SWI5 homolog (Protein SAE3 homolog) DNA repair protein SWI5 homolog (HBV DNAPTP1-transactivated protein A) (Protein SAE3 homolog) |
| Synonyms | C9orf119 SAE3 |
| Description | FUNCTION: Component of the SWI5-SFR1 complex, a complex required for double-strand break repair via homologous recombination. . FUNCTION: Component of the swi5-sfr1 complex, a complex required for double-strand break repair via homologous recombination. . FUNCTION: Component of the swi5-sfr1 complex, a complex required for double-strand break repair via homologous recombination. . FUNCTION: Component of the swi5-sfr1 complex, a complex required for double-strand break repair via homologous recombination. . FUNCTION: Component of the swi5-sfr1 complex, a complex required for double-strand break repair via homologous recombination. . FUNCTION: Component of the swi5-sfr1 complex, a complex required for double-strand break repair via homologous recombination. . FUNCTION: Component of the swi5-sfr1 complex, a complex required for double-strand break repair via homologous recombination. . FUNCTION: Component of the swi5-sfr1 complex, a complex required for double-strand break repair via homologous recombination. . |
| Accessions | H3BLW9 V9GZ11 ENST00000419867.7 ENST00000696406.1 ENST00000495313.5 H7C3F2 H7C5E9 ENST00000372898.6 Q1ZZU3 ENST00000652598.1 ENST00000418976.3 V9GYD7 A0A494C0Z4 ENST00000608796.6 A0A8Q3SIQ2 |
