Name | Number of supported studies | Average coverage | |
---|---|---|---|
adipocyte | 8 studies | 33% ± 7% | |
fibroblast | 7 studies | 21% ± 5% | |
epithelial cell | 7 studies | 34% ± 15% | |
endothelial cell | 6 studies | 27% ± 4% | |
GABAergic neuron | 6 studies | 37% ± 20% | |
retinal ganglion cell | 5 studies | 47% ± 24% | |
glutamatergic neuron | 5 studies | 49% ± 21% | |
oligodendrocyte | 5 studies | 29% ± 12% | |
kidney loop of Henle epithelial cell | 4 studies | 21% ± 5% | |
retina horizontal cell | 4 studies | 27% ± 6% | |
cardiac muscle cell | 4 studies | 19% ± 2% | |
ciliated cell | 4 studies | 26% ± 6% | |
astrocyte | 4 studies | 37% ± 20% | |
oligodendrocyte precursor cell | 4 studies | 25% ± 8% | |
interneuron | 4 studies | 45% ± 24% | |
myofibroblast cell | 3 studies | 18% ± 1% | |
pericyte | 3 studies | 22% ± 3% | |
smooth muscle cell | 3 studies | 18% ± 1% | |
retinal cone cell | 3 studies | 24% ± 9% | |
OFF-bipolar cell | 3 studies | 23% ± 10% | |
ON-bipolar cell | 3 studies | 27% ± 14% | |
rod bipolar cell | 3 studies | 22% ± 2% | |
dendritic cell | 3 studies | 24% ± 4% | |
macrophage | 3 studies | 19% ± 2% | |
basal cell | 3 studies | 41% ± 7% | |
neuron | 3 studies | 32% ± 7% | |
microglial cell | 3 studies | 21% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2536.73 | 1445 / 1445 | 100% | 14.37 | 183 / 183 |
ovary | 100% | 2210.75 | 180 / 180 | 100% | 11.89 | 429 / 430 |
stomach | 100% | 1953.34 | 359 / 359 | 100% | 18.19 | 285 / 286 |
intestine | 100% | 2618.59 | 966 / 966 | 100% | 20.33 | 525 / 527 |
breast | 100% | 2818.85 | 459 / 459 | 100% | 14.92 | 1113 / 1118 |
brain | 100% | 3404.93 | 2630 / 2642 | 100% | 20.20 | 705 / 705 |
thymus | 100% | 2345.64 | 652 / 653 | 99% | 15.33 | 599 / 605 |
prostate | 100% | 1907.74 | 244 / 245 | 99% | 14.09 | 498 / 502 |
uterus | 100% | 2399.74 | 170 / 170 | 98% | 13.58 | 452 / 459 |
lung | 99% | 1587.38 | 570 / 578 | 100% | 12.05 | 1153 / 1155 |
kidney | 100% | 2636.84 | 89 / 89 | 97% | 16.22 | 878 / 901 |
bladder | 100% | 2295.57 | 21 / 21 | 97% | 13.96 | 490 / 504 |
adrenal gland | 100% | 3085.57 | 258 / 258 | 95% | 15.23 | 218 / 230 |
skin | 100% | 2175.94 | 1806 / 1809 | 93% | 12.71 | 439 / 472 |
pancreas | 93% | 879.05 | 306 / 328 | 99% | 12.29 | 176 / 178 |
liver | 98% | 1011.97 | 222 / 226 | 80% | 5.38 | 326 / 406 |
adipose | 100% | 3041.21 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2824.76 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 7889.63 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1363.38 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.14 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 98% | 10.72 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 97% | 9.56 | 28 / 29 |
heart | 96% | 4480.61 | 827 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 73% | 5.58 | 58 / 80 |
peripheral blood | 32% | 677.96 | 298 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006105 | Biological process | succinate metabolic process |
GO_0006781 | Biological process | succinyl-CoA pathway |
GO_1901289 | Biological process | succinyl-CoA catabolic process |
GO_0006099 | Biological process | tricarboxylic acid cycle |
GO_0006104 | Biological process | succinyl-CoA metabolic process |
GO_0070062 | Cellular component | extracellular exosome |
GO_0009361 | Cellular component | succinate-CoA ligase complex (ADP-forming) |
GO_0042709 | Cellular component | succinate-CoA ligase complex |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005739 | Cellular component | mitochondrion |
GO_0004775 | Molecular function | succinate-CoA ligase (ADP-forming) activity |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
GO_0000287 | Molecular function | magnesium ion binding |
Gene name | SUCLA2 |
Protein name | Succinate-CoA ligase ADP-forming subunit beta Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial (EC 6.2.1.5) (ATP-specific succinyl-CoA synthetase subunit beta) (A-SCS) (Succinyl-CoA synthetase beta-A chain) (SCS-betaA) Succinate-CoA ligase ADP-forming beta subunit isoform 2 succinate--CoA ligase (ADP-forming) (EC 6.2.1.5) |
Synonyms | hCG_30751 |
Description | FUNCTION: ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA . The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit (By similarity). . FUNCTION: ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. . FUNCTION: ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. . FUNCTION: ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. . FUNCTION: ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. . FUNCTION: ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. . FUNCTION: ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. . FUNCTION: ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. . |
Accessions | ENST00000497202.6 ENST00000644338.1 Q9P2R7 A0A2R8Y5P4 ENST00000643246.1 ENST00000642944.1 A0A2R8Y6E6 ENST00000646932.1 [Q9P2R7-1] Q5T9Q5 A0A0U1RQL1 ENST00000643023.1 A0A2R8Y6Y7 ENST00000434484.5 Q7Z503 E5KS55 B4DRV2 A0A2R8Y5P6 Q5T9Q8 A0A2R8YDQ9 A0A0S2Z511 ENST00000433022.1 ENST00000493152.6 ENST00000634878.2 ENST00000646602.1 B7ZAF6 A0A2R8YF84 ENST00000647361.1 A0A0U1RRI1 ENST00000470760.2 ENST00000643584.1 [Q9P2R7-1] A0A0U1RQU7 A0A0U1RQF8 E5KS60 ENST00000646804.1 |