Name | Number of supported studies | Average coverage | |
---|---|---|---|
non-classical monocyte | 23 studies | 42% ± 17% | |
classical monocyte | 23 studies | 35% ± 13% | |
monocyte | 16 studies | 30% ± 7% | |
macrophage | 16 studies | 24% ± 9% | |
conventional dendritic cell | 14 studies | 30% ± 10% | |
dendritic cell | 10 studies | 30% ± 16% | |
myeloid cell | 6 studies | 38% ± 14% | |
mast cell | 5 studies | 23% ± 5% | |
neutrophil | 5 studies | 33% ± 13% | |
mononuclear phagocyte | 5 studies | 31% ± 13% | |
intermediate monocyte | 4 studies | 51% ± 14% | |
leukocyte | 4 studies | 23% ± 2% | |
alveolar macrophage | 4 studies | 21% ± 3% | |
type I pneumocyte | 3 studies | 26% ± 8% | |
endothelial cell of vascular tree | 3 studies | 24% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 1911.74 | 578 / 578 | 97% | 6.24 | 1119 / 1155 |
thymus | 99% | 719.91 | 648 / 653 | 96% | 5.18 | 578 / 605 |
breast | 99% | 1259.98 | 453 / 459 | 91% | 3.63 | 1016 / 1118 |
skin | 72% | 458.72 | 1299 / 1809 | 86% | 5.39 | 407 / 472 |
esophagus | 61% | 213.55 | 880 / 1445 | 92% | 5.30 | 168 / 183 |
adrenal gland | 87% | 367.81 | 225 / 258 | 53% | 1.42 | 123 / 230 |
kidney | 52% | 196.03 | 46 / 89 | 88% | 4.35 | 789 / 901 |
intestine | 61% | 214.91 | 594 / 966 | 69% | 2.29 | 365 / 527 |
bladder | 52% | 139.81 | 11 / 21 | 78% | 3.05 | 393 / 504 |
uterus | 28% | 77.72 | 48 / 170 | 80% | 3.72 | 366 / 459 |
stomach | 27% | 81.78 | 96 / 359 | 78% | 3.23 | 222 / 286 |
adipose | 100% | 1779.29 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 22.08 | 29 / 29 |
peripheral blood | 100% | 3675.30 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 1251.28 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 6.59 | 44 / 45 |
blood vessel | 92% | 392.67 | 1224 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 3% | 7.61 | 9 / 328 | 88% | 3.57 | 157 / 178 |
liver | 29% | 90.63 | 65 / 226 | 55% | 1.61 | 222 / 406 |
ovary | 11% | 27.28 | 19 / 180 | 68% | 1.78 | 293 / 430 |
heart | 78% | 295.09 | 673 / 861 | 0% | 0 | 0 / 0 |
brain | 7% | 21.81 | 194 / 2642 | 64% | 1.74 | 453 / 705 |
prostate | 21% | 56.27 | 51 / 245 | 48% | 0.94 | 239 / 502 |
eye | 0% | 0 | 0 / 0 | 59% | 1.72 | 47 / 80 |
muscle | 21% | 53.74 | 165 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0061025 | Biological process | membrane fusion |
GO_0031629 | Biological process | synaptic vesicle fusion to presynaptic active zone membrane |
GO_0006886 | Biological process | intracellular protein transport |
GO_0006887 | Biological process | exocytosis |
GO_0048278 | Biological process | vesicle docking |
GO_0048787 | Cellular component | presynaptic active zone membrane |
GO_0008021 | Cellular component | synaptic vesicle |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005886 | Cellular component | plasma membrane |
GO_0031201 | Cellular component | SNARE complex |
GO_0012505 | Cellular component | endomembrane system |
GO_0000149 | Molecular function | SNARE binding |
GO_0005484 | Molecular function | SNAP receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | STX11 |
Protein name | Syntaxin-11 |
Synonyms | |
Description | FUNCTION: SNARE that acts to regulate protein transport between late endosomes and the trans-Golgi network. |
Accessions | ENST00000698357.1 O75558 ENST00000698356.1 ENST00000367568.5 ENST00000698355.1 |