Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 19 studies | 39% ± 16% | |
oligodendrocyte | 16 studies | 34% ± 12% | |
endothelial cell of lymphatic vessel | 11 studies | 58% ± 28% | |
glutamatergic neuron | 11 studies | 56% ± 25% | |
astrocyte | 11 studies | 35% ± 15% | |
oligodendrocyte precursor cell | 11 studies | 32% ± 10% | |
GABAergic neuron | 10 studies | 54% ± 25% | |
neuron | 7 studies | 41% ± 15% | |
interneuron | 6 studies | 60% ± 20% | |
cardiac muscle cell | 5 studies | 30% ± 8% | |
retina horizontal cell | 5 studies | 21% ± 2% | |
type I pneumocyte | 5 studies | 49% ± 12% | |
type II pneumocyte | 5 studies | 41% ± 12% | |
epithelial cell | 4 studies | 36% ± 19% | |
granule cell | 4 studies | 43% ± 21% | |
vein endothelial cell | 4 studies | 35% ± 21% | |
Mueller cell | 4 studies | 42% ± 7% | |
fibroblast | 4 studies | 25% ± 11% | |
ciliated cell | 4 studies | 37% ± 15% | |
club cell | 4 studies | 34% ± 12% | |
basal cell | 4 studies | 36% ± 16% | |
GABAergic interneuron | 3 studies | 52% ± 2% | |
glial cell | 3 studies | 30% ± 8% | |
macrophage | 3 studies | 27% ± 11% | |
GABAergic amacrine cell | 3 studies | 19% ± 3% | |
glycinergic amacrine cell | 3 studies | 19% ± 4% | |
endothelial cell of vascular tree | 3 studies | 36% ± 13% | |
amacrine cell | 3 studies | 18% ± 3% | |
retinal pigment epithelial cell | 3 studies | 46% ± 11% | |
neural progenitor cell | 3 studies | 29% ± 6% | |
ependymal cell | 3 studies | 51% ± 3% | |
respiratory goblet cell | 3 studies | 27% ± 12% | |
adipocyte | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 3160.69 | 2642 / 2642 | 99% | 11.17 | 700 / 705 |
thymus | 100% | 2094.41 | 653 / 653 | 96% | 4.39 | 578 / 605 |
kidney | 94% | 893.13 | 84 / 89 | 91% | 4.44 | 817 / 901 |
uterus | 96% | 766.19 | 164 / 170 | 86% | 3.66 | 395 / 459 |
ovary | 94% | 911.64 | 170 / 180 | 85% | 2.59 | 366 / 430 |
pancreas | 99% | 1241.38 | 326 / 328 | 80% | 1.94 | 142 / 178 |
lung | 94% | 802.84 | 541 / 578 | 83% | 3.63 | 953 / 1155 |
esophagus | 94% | 1011.60 | 1353 / 1445 | 80% | 5.24 | 146 / 183 |
adrenal gland | 78% | 450.50 | 201 / 258 | 83% | 3.08 | 191 / 230 |
bladder | 100% | 1090.71 | 21 / 21 | 60% | 2.05 | 302 / 504 |
prostate | 99% | 1041.62 | 242 / 245 | 51% | 1.03 | 254 / 502 |
breast | 90% | 782.44 | 412 / 459 | 48% | 1.39 | 536 / 1118 |
stomach | 99% | 777.07 | 354 / 359 | 33% | 1.20 | 93 / 286 |
skin | 71% | 860.56 | 1284 / 1809 | 53% | 1.84 | 249 / 472 |
liver | 72% | 455.06 | 162 / 226 | 48% | 1.24 | 194 / 406 |
intestine | 89% | 695.89 | 860 / 966 | 17% | 0.51 | 92 / 527 |
spleen | 100% | 1460.88 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.90 | 1 / 1 |
heart | 94% | 980.77 | 811 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 5.63 | 41 / 45 |
adipose | 83% | 625.41 | 1003 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 80% | 2.11 | 64 / 80 |
blood vessel | 75% | 581.13 | 999 / 1335 | 0% | 0 | 0 / 0 |
muscle | 57% | 301.46 | 455 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.04 | 1 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001893 | Biological process | maternal placenta development |
GO_0009792 | Biological process | embryo development ending in birth or egg hatching |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005575 | Cellular component | cellular_component |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | STOX2 |
Protein name | Storkhead box 2 Storkhead-box protein 2 |
Synonyms | KIAA1392 |
Description | |
Accessions | ENST00000512520.1 ENST00000506529.1 ENST00000308497.9 [Q9P2F5-1] H0Y8U0 Q9P2F5 D6RDA5 ENST00000513034.3 H0YA59 |