Name | Number of supported studies | Average coverage | |
---|---|---|---|
non-classical monocyte | 6 studies | 21% ± 8% | |
monocyte | 5 studies | 20% ± 2% | |
classical monocyte | 5 studies | 20% ± 4% | |
endothelial cell | 5 studies | 21% ± 3% | |
myeloid cell | 5 studies | 19% ± 2% | |
epithelial cell | 5 studies | 25% ± 8% | |
macrophage | 5 studies | 21% ± 3% | |
ciliated cell | 4 studies | 19% ± 3% | |
glutamatergic neuron | 4 studies | 37% ± 18% | |
astrocyte | 3 studies | 24% ± 4% | |
GABAergic neuron | 3 studies | 34% ± 14% | |
abnormal cell | 3 studies | 20% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 26% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 7185.26 | 1445 / 1445 | 100% | 49.09 | 183 / 183 |
intestine | 100% | 6358.77 | 966 / 966 | 100% | 51.40 | 527 / 527 |
stomach | 100% | 5209.65 | 358 / 359 | 100% | 50.36 | 286 / 286 |
ovary | 100% | 6954.41 | 180 / 180 | 100% | 47.63 | 428 / 430 |
lung | 100% | 6789.21 | 577 / 578 | 100% | 44.21 | 1151 / 1155 |
prostate | 100% | 5401.15 | 245 / 245 | 99% | 38.68 | 499 / 502 |
breast | 100% | 4658.12 | 459 / 459 | 99% | 39.45 | 1111 / 1118 |
thymus | 100% | 5007.23 | 652 / 653 | 100% | 39.11 | 602 / 605 |
skin | 99% | 5285.88 | 1798 / 1809 | 100% | 49.40 | 470 / 472 |
pancreas | 100% | 4459.63 | 328 / 328 | 99% | 38.87 | 176 / 178 |
uterus | 100% | 4567.14 | 170 / 170 | 99% | 34.03 | 453 / 459 |
bladder | 100% | 7640.10 | 21 / 21 | 99% | 34.84 | 497 / 504 |
liver | 100% | 4211.89 | 226 / 226 | 98% | 26.19 | 398 / 406 |
kidney | 100% | 5075.17 | 89 / 89 | 98% | 29.82 | 880 / 901 |
brain | 94% | 2279.76 | 2476 / 2642 | 100% | 38.12 | 704 / 705 |
adrenal gland | 99% | 2589.67 | 255 / 258 | 93% | 22.56 | 214 / 230 |
adipose | 100% | 5183.65 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 40.47 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 61.28 | 29 / 29 |
muscle | 100% | 13518.17 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6435.26 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 36.95 | 45 / 45 |
blood vessel | 100% | 6926.45 | 1334 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 12112.80 | 926 / 929 | 0% | 0 | 0 / 0 |
heart | 99% | 4805.08 | 849 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010468 | Biological process | regulation of gene expression |
GO_0048286 | Biological process | lung alveolus development |
GO_0035264 | Biological process | multicellular organism growth |
GO_0043408 | Biological process | regulation of MAPK cascade |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0060425 | Biological process | lung morphogenesis |
GO_0003016 | Biological process | respiratory system process |
GO_0005977 | Biological process | glycogen metabolic process |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0004674 | Molecular function | protein serine/threonine kinase activity |
GO_0005515 | Molecular function | protein binding |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0005524 | Molecular function | ATP binding |
Gene name | STK40 |
Protein name | Serine/threonine-protein kinase 40 (EC 2.7.11.1) (SINK-homologous serine/threonine-protein kinase) (Sugen kinase 495) (SgK495) |
Synonyms | SHIK SGK495 |
Description | FUNCTION: May be a negative regulator of NF-kappa-B and p53-mediated gene transcription. . |
Accessions | ENST00000373130.7 [Q8N2I9-4] Q8N2I9 ENST00000373129.7 [Q8N2I9-1] ENST00000359297.6 [Q8N2I9-3] ENST00000373132.4 [Q8N2I9-1] |