SSPN report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	21 studies	32% ± 12%	Explore
smooth muscle cell	13 studies	25% ± 9%	Explore
astrocyte	9 studies	31% ± 10%	Explore
connective tissue cell	7 studies	26% ± 12%	Explore
myofibroblast cell	6 studies	28% ± 8%	Explore
pericyte	6 studies	22% ± 5%	Explore
memory B cell	6 studies	18% ± 2%	Explore
oligodendrocyte precursor cell	4 studies	26% ± 8%	Explore
plasma cell	3 studies	22% ± 4%	Explore
microglial cell	3 studies	23% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
uterus	3 studies	20% ± 5%	Explore
brain	3 studies	19% ± 2%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	100%	2509.81	180 / 180	99%	23.61	425 / 430
brain	95%	1283.88	2520 / 2642	99%	25.73	700 / 705
thymus	98%	1648.33	641 / 653	96%	21.21	579 / 605
breast	98%	2144.54	451 / 459	93%	13.95	1044 / 1118
prostate	99%	2121.38	242 / 245	93%	10.75	466 / 502
bladder	100%	3035.10	21 / 21	74%	6.42	371 / 504
lung	89%	1021.35	516 / 578	77%	7.55	895 / 1155
esophagus	84%	2317.48	1207 / 1445	79%	9.18	145 / 183
uterus	99%	2904.01	169 / 170	63%	6.92	290 / 459
adrenal gland	93%	986.29	239 / 258	65%	3.86	149 / 230
intestine	89%	2310.19	861 / 966	56%	4.87	295 / 527
kidney	42%	333.64	37 / 89	86%	14.56	778 / 901
stomach	53%	973.34	189 / 359	66%	6.56	188 / 286
skin	58%	490.86	1048 / 1809	57%	5.59	271 / 472
pancreas	14%	91.18	45 / 328	95%	14.13	169 / 178
blood vessel	100%	4580.01	1335 / 1335	0%	0	0 / 0
muscle	100%	3388.71	799 / 803	0%	0	0 / 0
adipose	99%	2031.43	1191 / 1204	0%	0	0 / 0
heart	96%	2521.51	828 / 861	0%	0	0 / 0
spleen	71%	500.07	172 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	62%	4.63	28 / 45
eye	0%	0	0 / 0	50%	3.59	40 / 80
lymph node	0%	0	0 / 0	14%	0.53	4 / 29
liver	0%	0	0 / 226	12%	0.88	48 / 406
peripheral blood	2%	9.93	16 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1