Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasma cell | 13 studies | 38% ± 14% | |
plasmablast | 9 studies | 42% ± 24% | |
epithelial cell | 6 studies | 33% ± 15% | |
oligodendrocyte | 5 studies | 26% ± 9% | |
ciliated cell | 4 studies | 26% ± 5% | |
fibroblast | 4 studies | 26% ± 14% | |
hematopoietic precursor cell | 3 studies | 17% ± 1% | |
IgA plasma cell | 3 studies | 28% ± 7% | |
IgG plasma cell | 3 studies | 24% ± 10% | |
macrophage | 3 studies | 18% ± 3% | |
GABAergic neuron | 3 studies | 33% ± 9% | |
glutamatergic neuron | 3 studies | 43% ± 8% | |
dendritic cell | 3 studies | 23% ± 1% | |
goblet cell | 3 studies | 26% ± 6% | |
intestinal crypt stem cell | 3 studies | 18% ± 1% | |
basal cell | 3 studies | 30% ± 11% | |
plasmacytoid dendritic cell | 3 studies | 22% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 4220.67 | 226 / 226 | 100% | 56.56 | 406 / 406 |
pancreas | 100% | 6628.66 | 328 / 328 | 100% | 51.13 | 178 / 178 |
prostate | 100% | 2382.94 | 245 / 245 | 100% | 79.55 | 502 / 502 |
stomach | 100% | 2656.98 | 359 / 359 | 100% | 48.37 | 286 / 286 |
esophagus | 100% | 2310.50 | 1444 / 1445 | 100% | 37.88 | 183 / 183 |
breast | 100% | 2175.14 | 459 / 459 | 100% | 73.19 | 1117 / 1118 |
bladder | 100% | 2282.29 | 21 / 21 | 100% | 58.50 | 503 / 504 |
uterus | 100% | 1877.22 | 170 / 170 | 100% | 68.76 | 458 / 459 |
ovary | 100% | 1778.06 | 180 / 180 | 100% | 30.73 | 429 / 430 |
skin | 100% | 2899.78 | 1808 / 1809 | 100% | 58.21 | 471 / 472 |
thymus | 100% | 2416.53 | 653 / 653 | 100% | 36.43 | 603 / 605 |
kidney | 100% | 2089.01 | 89 / 89 | 100% | 44.04 | 898 / 901 |
intestine | 100% | 1794.59 | 965 / 966 | 100% | 60.75 | 525 / 527 |
lung | 99% | 2389.96 | 575 / 578 | 100% | 68.02 | 1152 / 1155 |
adrenal gland | 100% | 3704.17 | 258 / 258 | 99% | 49.15 | 228 / 230 |
brain | 99% | 1633.92 | 2607 / 2642 | 100% | 48.52 | 705 / 705 |
lymph node | 0% | 0 | 0 / 0 | 100% | 51.80 | 29 / 29 |
spleen | 100% | 2315.87 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 65.80 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 23.62 | 1 / 1 |
adipose | 100% | 2171.26 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 1652.76 | 798 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1692.66 | 1326 / 1335 | 0% | 0 | 0 / 0 |
heart | 96% | 1608.63 | 823 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 85% | 21.02 | 68 / 80 |
peripheral blood | 66% | 1096.61 | 613 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045047 | Biological process | protein targeting to ER |
GO_0006617 | Biological process | SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition |
GO_0005785 | Cellular component | signal recognition particle receptor complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005881 | Cellular component | cytoplasmic microtubule |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005525 | Molecular function | GTP binding |
Gene name | SRPRB |
Protein name | Signal recognition particle receptor subunit beta (SR-beta) (Protein APMCF1) Signal recognition particle receptor subunit beta |
Synonyms | PSEC0230 hCG_2023561 |
Description | FUNCTION: Component of the signal recognition particle (SRP) complex receptor (SR) (By similarity). Ensures, in conjunction with the SRP complex, the correct targeting of the nascent secretory proteins to the endoplasmic reticulum membrane system (By similarity). May mediate the membrane association of SR (By similarity). . |
Accessions | ENST00000466490.7 Q9Y5M8 ENST00000466636.1 ENST00000678299.1 Q549N5 H7C4H2 ENST00000484684.1 C9J5Z8 |