Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| cardiac muscle cell | 4 studies | 20% ± 1% | |
| GABAergic neuron | 4 studies | 42% ± 16% | |
| erythrocyte | 4 studies | 47% ± 14% | |
| glutamatergic neuron | 3 studies | 47% ± 16% | |
| granule cell | 3 studies | 21% ± 2% | |
| interneuron | 3 studies | 43% ± 22% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 28% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 80% | 2283.93 | 2121 / 2642 | 41% | 1.41 | 288 / 705 |
| muscle | 100% | 26720.14 | 803 / 803 | 0% | 0 | 0 / 0 |
| heart | 92% | 4307.99 | 792 / 861 | 0% | 0 | 0 / 0 |
| lung | 31% | 201.44 | 179 / 578 | 43% | 3.82 | 491 / 1155 |
| adrenal gland | 5% | 49.53 | 14 / 258 | 68% | 9.54 | 156 / 230 |
| blood vessel | 61% | 670.73 | 816 / 1335 | 0% | 0 | 0 / 0 |
| peripheral blood | 61% | 1168.59 | 564 / 929 | 0% | 0 | 0 / 0 |
| kidney | 48% | 313.72 | 43 / 89 | 7% | 0.14 | 60 / 901 |
| pancreas | 6% | 35.21 | 20 / 328 | 35% | 1.00 | 63 / 178 |
| uterus | 6% | 29.88 | 10 / 170 | 25% | 1.09 | 114 / 459 |
| esophagus | 2% | 40.07 | 30 / 1445 | 27% | 0.63 | 50 / 183 |
| tonsil | 0% | 0 | 0 / 0 | 29% | 0.88 | 13 / 45 |
| spleen | 26% | 284.05 | 63 / 241 | 0% | 0 | 0 / 0 |
| ovary | 4% | 23.22 | 8 / 180 | 22% | 0.63 | 93 / 430 |
| bladder | 0% | 0 | 0 / 21 | 17% | 0.67 | 88 / 504 |
| prostate | 8% | 122.30 | 20 / 245 | 9% | 0.31 | 45 / 502 |
| breast | 6% | 43.24 | 29 / 459 | 9% | 0.19 | 97 / 1118 |
| thymus | 1% | 13.88 | 8 / 653 | 10% | 0.41 | 61 / 605 |
| intestine | 1% | 6.42 | 12 / 966 | 9% | 0.18 | 46 / 527 |
| liver | 1% | 7.08 | 2 / 226 | 8% | 0.17 | 31 / 406 |
| stomach | 0% | 1.66 | 1 / 359 | 8% | 0.19 | 22 / 286 |
| adipose | 7% | 44.19 | 86 / 1204 | 0% | 0 | 0 / 0 |
| skin | 0% | 18.24 | 5 / 1809 | 7% | 0.17 | 31 / 472 |
| lymph node | 0% | 0 | 0 / 0 | 3% | 0.07 | 1 / 29 |
| eye | 0% | 0 | 0 / 0 | 1% | 0.04 | 1 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0051693 | Biological process | actin filament capping |
| GO_0030036 | Biological process | actin cytoskeleton organization |
| GO_0098885 | Biological process | modification of postsynaptic actin cytoskeleton |
| GO_0098978 | Cellular component | glutamatergic synapse |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0009898 | Cellular component | cytoplasmic side of plasma membrane |
| GO_0032991 | Cellular component | protein-containing complex |
| GO_0098794 | Cellular component | postsynapse |
| GO_0030864 | Cellular component | cortical actin cytoskeleton |
| GO_0014731 | Cellular component | spectrin-associated cytoskeleton |
| GO_0015629 | Cellular component | actin cytoskeleton |
| GO_0005829 | Cellular component | cytosol |
| GO_0042995 | Cellular component | cell projection |
| GO_0030054 | Cellular component | cell junction |
| GO_0008091 | Cellular component | spectrin |
| GO_0005200 | Molecular function | structural constituent of cytoskeleton |
| GO_0051015 | Molecular function | actin filament binding |
| GO_0030506 | Molecular function | ankyrin binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0003779 | Molecular function | actin binding |
| Gene name | SPTB |
| Protein name | Beta-spectrin Spectrin beta chain Spectrin beta chain, erythrocytic (Beta-I spectrin) Spectrin beta, erythrocytic |
| Synonyms | SPTB1 |
| Description | FUNCTION: Spectrin is the major constituent of the cytoskeletal network underlying the erythrocyte plasma membrane. It associates with band 4.1 and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. |
| Accessions | ENST00000553938.5 ENST00000644917.1 [P11277-2] H0YJE6 B2RMN7 A1YZ73 ENST00000389722.7 [P11277-2] ENST00000389720.4 [P11277-1] P11277 |
