SPON1 | OmnibusX

Name	Number of supported studies	Average coverage
fibroblast	21 studies	28% ± 12%	Explore
astrocyte	18 studies	50% ± 20%	Explore
adipocyte	8 studies	46% ± 12%	Explore
myofibroblast cell	6 studies	40% ± 15%	Explore
Mueller cell	6 studies	62% ± 15%	Explore
oligodendrocyte precursor cell	5 studies	24% ± 6%	Explore
connective tissue cell	4 studies	27% ± 11%	Explore
pericyte	3 studies	28% ± 9%	Explore
smooth muscle cell	3 studies	31% ± 6%	Explore
adventitial cell	3 studies	30% ± 7%	Explore

Name	Number of supported studies	Average coverage
brain	4 studies	22% ± 6%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	99%	5578.08	178 / 180	95%	557.82	410 / 430
brain	88%	3317.28	2334 / 2642	90%	119.64	637 / 705
breast	95%	4577.09	435 / 459	67%	36.35	754 / 1118
lung	100%	11991.03	577 / 578	59%	28.16	685 / 1155
stomach	98%	5898.63	353 / 359	51%	34.08	147 / 286
intestine	97%	3574.43	938 / 966	49%	27.85	260 / 527
bladder	100%	10118.29	21 / 21	34%	15.40	170 / 504
esophagus	90%	2984.15	1298 / 1445	40%	17.54	74 / 183
kidney	71%	2181.52	63 / 89	55%	73.40	496 / 901
uterus	99%	4901.68	168 / 170	26%	18.15	120 / 459
prostate	92%	3516.48	225 / 245	31%	8.43	154 / 502
adrenal gland	95%	3329.19	246 / 258	20%	15.08	47 / 230
pancreas	27%	351.01	87 / 328	78%	56.38	138 / 178
adipose	98%	7083.40	1176 / 1204	0%	0	0 / 0
skin	67%	1437.83	1213 / 1809	21%	10.58	98 / 472
blood vessel	87%	3251.88	1167 / 1335	0%	0	0 / 0
heart	75%	3113.13	642 / 861	0%	0	0 / 0
spleen	74%	1972.80	178 / 241	0%	0	0 / 0
thymus	64%	1170.46	417 / 653	9%	3.71	53 / 605
liver	5%	63.50	11 / 226	2%	0.78	8 / 406
tonsil	0%	0	0 / 0	7%	2.18	3 / 45
eye	0%	0	0 / 0	5%	2.22	4 / 80
muscle	3%	48.74	22 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_1902430	Biological process	negative regulation of amyloid-beta formation
GO_0016485	Biological process	protein processing
GO_0007155	Biological process	cell adhesion
GO_1902993	Biological process	positive regulation of amyloid precursor protein catabolic process
GO_0010954	Biological process	positive regulation of protein processing
GO_0005615	Cellular component	extracellular space
GO_0005788	Cellular component	endoplasmic reticulum lumen
GO_0062023	Cellular component	collagen-containing extracellular matrix
GO_0031012	Cellular component	extracellular matrix
GO_0005201	Molecular function	extracellular matrix structural constituent
GO_0046872	Molecular function	metal ion binding
GO_0005515	Molecular function	protein binding
GO_0050693	Molecular function	LBD domain binding

Gene name	SPON1
Protein name	Spondin-1 (F-spondin) (Vascular smooth muscle cell growth-promoting factor) SPON1 protein
Synonyms	VSGP KIAA0762
Description	FUNCTION: Cell adhesion protein that promotes the attachment of spinal cord and sensory neuron cells and the outgrowth of neurites in vitro. May contribute to the growth and guidance of axons in both the spinal cord and the PNS (By similarity). Major factor for vascular smooth muscle cell. .
Accessions	Q3ZCT3 ENST00000576479.4 Q9HCB6

SPON1 report