Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 14 studies | 61% ± 18% | |
GABAergic neuron | 10 studies | 46% ± 16% | |
glutamatergic neuron | 10 studies | 47% ± 19% | |
interneuron | 6 studies | 46% ± 21% | |
astrocyte | 4 studies | 33% ± 25% | |
neuron | 3 studies | 31% ± 9% | |
endothelial cell | 3 studies | 56% ± 16% | |
GABAergic interneuron | 3 studies | 47% ± 12% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 13 studies | 31% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 982.37 | 2598 / 2642 | 92% | 15.29 | 649 / 705 |
adrenal gland | 38% | 119.41 | 98 / 258 | 46% | 5.89 | 106 / 230 |
ovary | 63% | 290.26 | 113 / 180 | 1% | 0.02 | 3 / 430 |
kidney | 20% | 26.22 | 18 / 89 | 32% | 6.98 | 288 / 901 |
intestine | 44% | 100.79 | 426 / 966 | 0% | 0.01 | 1 / 527 |
stomach | 31% | 59.92 | 112 / 359 | 1% | 0.07 | 2 / 286 |
esophagus | 21% | 28.78 | 307 / 1445 | 1% | 0.05 | 2 / 183 |
uterus | 12% | 33.24 | 21 / 170 | 7% | 0.55 | 30 / 459 |
bladder | 5% | 5.43 | 1 / 21 | 1% | 0.06 | 5 / 504 |
skin | 4% | 6.08 | 81 / 1809 | 1% | 0.07 | 6 / 472 |
prostate | 5% | 6.89 | 13 / 245 | 0% | 0 | 0 / 502 |
breast | 1% | 1.43 | 5 / 459 | 2% | 0.17 | 24 / 1118 |
lung | 0% | 0.17 | 1 / 578 | 3% | 0.13 | 30 / 1155 |
adipose | 3% | 3.73 | 33 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 2% | 3.40 | 30 / 1335 | 0% | 0 | 0 / 0 |
heart | 2% | 1.71 | 14 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 2.45 | 13 / 929 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0.01 | 1 / 406 |
thymus | 0% | 0.12 | 1 / 653 | 0% | 0 | 0 / 605 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
pancreas | 0% | 0 | 0 / 328 | 0% | 0 | 0 / 178 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007613 | Biological process | memory |
GO_0099170 | Biological process | postsynaptic modulation of chemical synaptic transmission |
GO_0007218 | Biological process | neuropeptide signaling pathway |
GO_1900452 | Biological process | regulation of long-term synaptic depression |
GO_0007612 | Biological process | learning |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0098839 | Cellular component | postsynaptic density membrane |
GO_0016020 | Cellular component | membrane |
GO_0008188 | Molecular function | neuropeptide receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SORCS3 |
Protein name | SORCS3 protein Sortilin-related VPS10 domain containing receptor 3 VPS10 domain-containing receptor SorCS3 Sortilin related VPS10 domain containing receptor 3 |
Synonyms | KIAA1059 |
Description | |
Accessions | Q17R88 Q9UPU3 ENST00000369701.8 ENST00000393176.2 Q5CAJ2 Q86XB2 |