Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 10 studies | 39% ± 17% | |
naive B cell | 10 studies | 19% ± 6% | |
B cell | 9 studies | 20% ± 4% | |
memory B cell | 7 studies | 20% ± 5% | |
type I pneumocyte | 3 studies | 20% ± 4% |
Insufficient scRNA-seq data for expression of SNX22 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 10282.16 | 653 / 653 | 97% | 123.83 | 587 / 605 |
brain | 100% | 1821.23 | 2634 / 2642 | 90% | 44.08 | 635 / 705 |
prostate | 87% | 1059.20 | 212 / 245 | 78% | 7.41 | 393 / 502 |
liver | 88% | 475.59 | 198 / 226 | 36% | 3.84 | 146 / 406 |
lung | 98% | 1176.25 | 565 / 578 | 13% | 0.87 | 150 / 1155 |
spleen | 100% | 1278.87 | 241 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 86% | 23.01 | 25 / 29 |
peripheral blood | 83% | 728.14 | 770 / 929 | 0% | 0 | 0 / 0 |
kidney | 55% | 185.58 | 49 / 89 | 15% | 1.00 | 132 / 901 |
stomach | 64% | 306.26 | 228 / 359 | 2% | 0.27 | 6 / 286 |
pancreas | 57% | 210.16 | 186 / 328 | 7% | 0.83 | 13 / 178 |
heart | 63% | 1041.19 | 539 / 861 | 0% | 0 | 0 / 0 |
breast | 14% | 51.99 | 66 / 459 | 34% | 3.38 | 378 / 1118 |
adrenal gland | 40% | 159.89 | 103 / 258 | 8% | 0.50 | 18 / 230 |
skin | 3% | 10.14 | 63 / 1809 | 35% | 10.11 | 166 / 472 |
intestine | 26% | 216.01 | 249 / 966 | 3% | 0.42 | 15 / 527 |
tonsil | 0% | 0 | 0 / 0 | 24% | 1.39 | 11 / 45 |
bladder | 10% | 23.19 | 2 / 21 | 6% | 0.60 | 29 / 504 |
uterus | 9% | 23.36 | 15 / 170 | 6% | 0.31 | 28 / 459 |
adipose | 13% | 41.46 | 158 / 1204 | 0% | 0 | 0 / 0 |
ovary | 9% | 28.06 | 16 / 180 | 3% | 0.19 | 12 / 430 |
esophagus | 9% | 26.11 | 125 / 1445 | 2% | 0.18 | 4 / 183 |
eye | 0% | 0 | 0 / 0 | 9% | 0.60 | 7 / 80 |
blood vessel | 2% | 8.30 | 21 / 1335 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.35 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0015031 | Biological process | protein transport |
GO_0030659 | Cellular component | cytoplasmic vesicle membrane |
GO_1901981 | Molecular function | phosphatidylinositol phosphate binding |
GO_0005515 | Molecular function | protein binding |
Gene name | SNX22 |
Protein name | SNX22 protein Sorting nexin-22 |
Synonyms | |
Description | FUNCTION: May be involved in several stages of intracellular trafficking (By similarity). Interacts with membranes containing phosphatidylinositol 3-phosphate (PtdIns(3P)) . . |
Accessions | Q96L94 ENST00000558466.5 [Q96L94-2] ENST00000325881.9 [Q96L94-1] Q8N2U4 |