Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasmacytoid dendritic cell | 9 studies | 27% ± 9% | |
non-classical monocyte | 8 studies | 29% ± 13% | |
CD16-negative, CD56-bright natural killer cell, human | 5 studies | 18% ± 3% | |
classical monocyte | 5 studies | 26% ± 8% | |
natural killer cell | 5 studies | 19% ± 2% | |
conventional dendritic cell | 4 studies | 26% ± 8% | |
epithelial cell | 4 studies | 30% ± 9% | |
endothelial cell | 4 studies | 23% ± 4% | |
macrophage | 4 studies | 25% ± 6% | |
hematopoietic precursor cell | 3 studies | 22% ± 4% | |
ciliated cell | 3 studies | 27% ± 3% | |
dendritic cell | 3 studies | 34% ± 11% | |
goblet cell | 3 studies | 16% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 1842.10 | 21 / 21 | 100% | 22.69 | 504 / 504 |
brain | 100% | 1478.57 | 2642 / 2642 | 100% | 29.86 | 705 / 705 |
breast | 100% | 1895.85 | 459 / 459 | 100% | 39.34 | 1118 / 1118 |
esophagus | 100% | 2021.76 | 1445 / 1445 | 100% | 25.42 | 183 / 183 |
intestine | 100% | 2043.50 | 966 / 966 | 100% | 19.78 | 527 / 527 |
liver | 100% | 1563.62 | 226 / 226 | 100% | 24.53 | 406 / 406 |
ovary | 100% | 1549.36 | 180 / 180 | 100% | 18.34 | 430 / 430 |
prostate | 100% | 1576.93 | 245 / 245 | 100% | 26.30 | 502 / 502 |
skin | 100% | 2220.57 | 1809 / 1809 | 100% | 35.94 | 472 / 472 |
stomach | 100% | 1647.91 | 359 / 359 | 100% | 22.12 | 286 / 286 |
uterus | 100% | 1690.79 | 170 / 170 | 100% | 25.49 | 459 / 459 |
thymus | 100% | 1389.24 | 653 / 653 | 100% | 21.72 | 604 / 605 |
kidney | 100% | 1427.49 | 89 / 89 | 100% | 20.47 | 899 / 901 |
lung | 100% | 1551.83 | 577 / 578 | 100% | 24.22 | 1154 / 1155 |
pancreas | 99% | 942.64 | 326 / 328 | 100% | 19.82 | 178 / 178 |
adrenal gland | 100% | 1876.67 | 258 / 258 | 98% | 16.15 | 226 / 230 |
adipose | 100% | 2038.72 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 31.01 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 26.37 | 29 / 29 |
muscle | 100% | 2274.28 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1891.32 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 23.67 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.94 | 1 / 1 |
blood vessel | 100% | 1757.47 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 1496.09 | 845 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 1529.35 | 909 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0061025 | Biological process | membrane fusion |
GO_0016240 | Biological process | autophagosome membrane docking |
GO_0006903 | Biological process | vesicle targeting |
GO_0006887 | Biological process | exocytosis |
GO_0016082 | Biological process | synaptic vesicle priming |
GO_0031629 | Biological process | synaptic vesicle fusion to presynaptic active zone membrane |
GO_0015031 | Biological process | protein transport |
GO_0097352 | Biological process | autophagosome maturation |
GO_0098793 | Cellular component | presynapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0005813 | Cellular component | centrosome |
GO_0000421 | Cellular component | autophagosome membrane |
GO_0035577 | Cellular component | azurophil granule membrane |
GO_0000139 | Cellular component | Golgi membrane |
GO_0020018 | Cellular component | ciliary pocket membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005776 | Cellular component | autophagosome |
GO_0005737 | Cellular component | cytoplasm |
GO_0031201 | Cellular component | SNARE complex |
GO_0005484 | Molecular function | SNAP receptor activity |
GO_0005515 | Molecular function | protein binding |
GO_0019905 | Molecular function | syntaxin binding |
Gene name | SNAP29 |
Protein name | Alternative protein SNAP29 Synaptosomal-associated protein 29 (Soluble 29 kDa NSF attachment protein) (Vesicle-membrane fusion protein SNAP-29) Synaptosomal-associated protein 29 (SNAP-29) (Soluble 29 kDa NSF attachment protein) (Vesicle-membrane fusion protein SNAP-29) |
Synonyms | |
Description | FUNCTION: SNAREs, soluble N-ethylmaleimide-sensitive factor-attachment protein receptors, are essential proteins for fusion of cellular membranes. SNAREs localized on opposing membranes assemble to form a trans-SNARE complex, an extended, parallel four alpha-helical bundle that drives membrane fusion. SNAP29 is a SNARE involved in autophagy through the direct control of autophagosome membrane fusion with the lysososome membrane. Also plays a role in ciliogenesis by regulating membrane fusions. . FUNCTION: SNAREs, soluble N-ethylmaleimide-sensitive factor-attachment protein receptors, are essential proteins for fusion of cellular membranes. SNAREs localized on opposing membranes assemble to form a trans-SNARE complex, an extended, parallel four alpha-helical bundle that drives membrane fusion. SNAP29 is a SNARE involved in autophagy through the direct control of autophagosome membrane fusion with the lysososome membrane. Also plays a role in ciliogenesis by regulating membrane fusions. . |
Accessions | ENST00000215730.12 L8E847 C9JAF7 O95721 ENST00000439214.1 |