Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 4 studies | 29% ± 8% | |
| endothelial cell | 3 studies | 20% ± 3% | |
| epithelial cell | 3 studies | 19% ± 3% | |
| macrophage | 3 studies | 19% ± 2% | |
| interneuron | 3 studies | 26% ± 12% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 21% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 1424.09 | 245 / 245 | 100% | 6.77 | 500 / 502 |
| esophagus | 100% | 983.67 | 1445 / 1445 | 99% | 7.79 | 182 / 183 |
| lung | 100% | 1205.66 | 577 / 578 | 99% | 6.88 | 1147 / 1155 |
| breast | 100% | 1584.49 | 459 / 459 | 99% | 7.07 | 1108 / 1118 |
| thymus | 100% | 1280.76 | 653 / 653 | 99% | 7.79 | 599 / 605 |
| brain | 99% | 761.58 | 2603 / 2642 | 100% | 9.44 | 705 / 705 |
| skin | 100% | 1064.79 | 1809 / 1809 | 99% | 8.29 | 465 / 472 |
| kidney | 100% | 704.82 | 89 / 89 | 98% | 9.24 | 886 / 901 |
| stomach | 100% | 832.41 | 359 / 359 | 98% | 5.63 | 281 / 286 |
| uterus | 100% | 1603.99 | 170 / 170 | 98% | 7.33 | 450 / 459 |
| intestine | 100% | 1409.30 | 966 / 966 | 98% | 5.14 | 516 / 527 |
| bladder | 100% | 1498.10 | 21 / 21 | 98% | 5.50 | 492 / 504 |
| pancreas | 99% | 693.45 | 326 / 328 | 97% | 5.29 | 173 / 178 |
| adrenal gland | 100% | 1280.61 | 258 / 258 | 95% | 5.64 | 218 / 230 |
| ovary | 100% | 1811.04 | 180 / 180 | 91% | 4.67 | 393 / 430 |
| liver | 100% | 541.44 | 226 / 226 | 70% | 3.09 | 286 / 406 |
| adipose | 100% | 1565.09 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 1243.22 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 8.30 | 29 / 29 |
| muscle | 100% | 1617.47 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1325.38 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 8.77 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 2.01 | 1 / 1 |
| eye | 0% | 0 | 0 / 0 | 98% | 9.50 | 78 / 80 |
| heart | 97% | 858.88 | 839 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 77% | 643.44 | 712 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0032259 | Biological process | methylation |
| GO_0007507 | Biological process | heart development |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005634 | Cellular component | nucleus |
| GO_0008168 | Molecular function | methyltransferase activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0046872 | Molecular function | metal ion binding |
| GO_0042826 | Molecular function | histone deacetylase binding |
| Gene name | SMYD4 |
| Protein name | SET and MYND domain-containing protein 4 SET and MYND domain-containing protein 4 (EC 2.1.1.-) SET and MYND domain containing 4 |
| Synonyms | KIAA1936 |
| Description | FUNCTION: Plays a critical role in cardiac development . Acts as a key epigenetic regulator of gene expression during cardiac development via its dual activities as a methyltransferase and negative regulator of HDAC1 (By similarity). . |
| Accessions | I3L1V4 I3L2P4 Q8IYR2 ENST00000491788.1 ENST00000576633.1 I3L496 I3L428 ENST00000305513.12 ENST00000571854.5 ENST00000570368.5 |
