Name | Number of supported studies | Average coverage | |
---|---|---|---|
erythrocyte | 7 studies | 43% ± 22% | |
erythroblast | 5 studies | 42% ± 24% | |
mast cell | 3 studies | 22% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
liver | 3 studies | 44% ± 29% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 98% | 161.57 | 241 / 245 | 99% | 18.64 | 498 / 502 |
ovary | 99% | 188.57 | 179 / 180 | 98% | 20.48 | 420 / 430 |
thymus | 100% | 223.66 | 652 / 653 | 96% | 44.47 | 580 / 605 |
kidney | 100% | 286.06 | 89 / 89 | 88% | 8.14 | 796 / 901 |
liver | 99% | 140.80 | 223 / 226 | 80% | 8.50 | 326 / 406 |
pancreas | 99% | 116.24 | 326 / 328 | 67% | 3.98 | 119 / 178 |
breast | 81% | 77.12 | 373 / 459 | 82% | 9.54 | 920 / 1118 |
lung | 87% | 84.24 | 503 / 578 | 68% | 7.19 | 784 / 1155 |
bladder | 100% | 79.67 | 21 / 21 | 43% | 3.35 | 216 / 504 |
adrenal gland | 82% | 56.85 | 212 / 258 | 57% | 8.82 | 132 / 230 |
stomach | 99% | 108.14 | 355 / 359 | 37% | 2.25 | 107 / 286 |
skin | 58% | 32.59 | 1041 / 1809 | 78% | 9.80 | 369 / 472 |
uterus | 92% | 91.53 | 156 / 170 | 39% | 4.06 | 178 / 459 |
intestine | 79% | 51.36 | 763 / 966 | 35% | 2.01 | 182 / 527 |
eye | 0% | 0 | 0 / 0 | 99% | 21.68 | 79 / 80 |
esophagus | 69% | 44.79 | 997 / 1445 | 28% | 1.58 | 51 / 183 |
heart | 97% | 382.78 | 832 / 861 | 0% | 0 | 0 / 0 |
spleen | 93% | 81.37 | 225 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 90% | 632.99 | 833 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 86% | 66.84 | 1153 / 1335 | 0% | 0 | 0 / 0 |
adipose | 63% | 38.98 | 753 / 1204 | 0% | 0 | 0 / 0 |
brain | 44% | 27.28 | 1150 / 2642 | 6% | 0.28 | 39 / 705 |
tonsil | 0% | 0 | 0 / 0 | 33% | 1.95 | 15 / 45 |
lymph node | 0% | 0 | 0 / 0 | 28% | 1.49 | 8 / 29 |
muscle | 8% | 3.19 | 67 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0009986 | Cellular component | cell surface |
GO_0005886 | Cellular component | plasma membrane |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SMIM1 |
Protein name | Small integral membrane protein 1 Small integral membrane protein 1 (Vel blood group antigen) Small integral membrane protein 1 (Small integral protein 1) Small integral membrane protein 1 (Vel blood group) |
Synonyms | |
Description | FUNCTION: Regulator of red blood cell formation. . |
Accessions | A0A2R8Y7R4 ENST00000642557 ENST00000561886.2 H3BS66 M4WDD3 B2RUZ4 A0A223AMS5 N1IRL5 A0A5Q0LQ04 ENST00000444870.7 ENST00000642557.4 |