Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 7 studies | 28% ± 15% | |
astrocyte | 6 studies | 25% ± 9% | |
type I pneumocyte | 5 studies | 24% ± 6% | |
goblet cell | 4 studies | 25% ± 10% | |
intestinal crypt stem cell | 3 studies | 22% ± 5% |
Insufficient scRNA-seq data for expression of SLC44A3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 1470.98 | 328 / 328 | 98% | 44.08 | 174 / 178 |
kidney | 100% | 1681.51 | 89 / 89 | 98% | 55.26 | 879 / 901 |
prostate | 99% | 754.11 | 242 / 245 | 97% | 26.35 | 488 / 502 |
intestine | 98% | 1236.86 | 943 / 966 | 98% | 58.88 | 516 / 527 |
stomach | 97% | 1128.82 | 349 / 359 | 97% | 43.24 | 277 / 286 |
lung | 99% | 610.42 | 571 / 578 | 85% | 21.41 | 984 / 1155 |
adrenal gland | 100% | 785.95 | 257 / 258 | 71% | 24.83 | 164 / 230 |
thymus | 99% | 450.98 | 648 / 653 | 71% | 8.73 | 428 / 605 |
brain | 97% | 589.50 | 2556 / 2642 | 69% | 11.86 | 489 / 705 |
bladder | 71% | 756.48 | 15 / 21 | 93% | 50.98 | 471 / 504 |
uterus | 82% | 212.61 | 139 / 170 | 81% | 21.45 | 372 / 459 |
breast | 70% | 410.77 | 321 / 459 | 85% | 16.76 | 945 / 1118 |
skin | 84% | 357.85 | 1513 / 1809 | 60% | 11.71 | 281 / 472 |
esophagus | 71% | 381.89 | 1027 / 1445 | 63% | 16.91 | 116 / 183 |
liver | 61% | 152.25 | 137 / 226 | 72% | 25.93 | 294 / 406 |
ovary | 61% | 123.58 | 110 / 180 | 51% | 6.88 | 218 / 430 |
ureter | 0% | 0 | 0 / 0 | 100% | 56.77 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 85% | 38.45 | 68 / 80 |
blood vessel | 77% | 208.99 | 1024 / 1335 | 0% | 0 | 0 / 0 |
heart | 74% | 189.78 | 641 / 861 | 0% | 0 | 0 / 0 |
adipose | 54% | 125.31 | 656 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 51% | 7.31 | 23 / 45 |
spleen | 7% | 11.36 | 18 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 0.95 | 5 / 929 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.33 | 2 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006656 | Biological process | phosphatidylcholine biosynthetic process |
GO_0015871 | Biological process | choline transport |
GO_0055085 | Biological process | transmembrane transport |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0015220 | Molecular function | choline transmembrane transporter activity |
GO_0022857 | Molecular function | transmembrane transporter activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SLC44A3 |
Protein name | Choline transporter-like protein 3 (Solute carrier family 44 member 3) Choline transporter-like protein Solute carrier family 44 member 3 |
Synonyms | CTL3 UNQ558/PRO1115 |
Description | FUNCTION: Choline transporter. . FUNCTION: Choline transporter. . |
Accessions | ENST00000527077.5 [Q8N4M1-4] H0YDW5 Q8N4M1 ENST00000446120.6 [Q8N4M1-3] ENST00000475883.5 ENST00000422520.6 E9PIC5 ENST00000532427.5 ENST00000529450.5 [Q8N4M1-6] ENST00000532670.1 ENST00000271227.11 [Q8N4M1-1] ENST00000467909.5 [Q8N4M1-2] F8W7F3 H0YD35 |