Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| macrophage | 11 studies | 35% ± 13% | |
| glutamatergic neuron | 9 studies | 41% ± 28% | |
| endothelial cell | 6 studies | 29% ± 10% | |
| oligodendrocyte precursor cell | 6 studies | 25% ± 10% | |
| ciliated cell | 6 studies | 24% ± 9% | |
| GABAergic neuron | 6 studies | 43% ± 23% | |
| astrocyte | 6 studies | 33% ± 11% | |
| myeloid cell | 4 studies | 36% ± 27% | |
| interneuron | 4 studies | 45% ± 24% | |
| neuron | 3 studies | 24% ± 9% | |
| GABAergic interneuron | 3 studies | 20% ± 3% | |
| epithelial cell | 3 studies | 20% ± 3% | |
| fibroblast | 3 studies | 19% ± 4% | |
| ependymal cell | 3 studies | 29% ± 11% | |
| alveolar macrophage | 3 studies | 35% ± 9% | |
| adipocyte | 3 studies | 20% ± 3% | |
| oligodendrocyte | 3 studies | 25% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| adrenal gland | 100% | 779.82 | 258 / 258 | 100% | 6.64 | 230 / 230 |
| breast | 100% | 585.44 | 459 / 459 | 100% | 6.57 | 1118 / 1118 |
| ovary | 100% | 611.91 | 180 / 180 | 100% | 4.69 | 430 / 430 |
| prostate | 100% | 574.75 | 245 / 245 | 100% | 4.32 | 502 / 502 |
| thymus | 100% | 622.30 | 653 / 653 | 100% | 5.22 | 605 / 605 |
| uterus | 100% | 599.57 | 170 / 170 | 100% | 5.18 | 459 / 459 |
| brain | 100% | 553.93 | 2638 / 2642 | 100% | 5.46 | 705 / 705 |
| lung | 100% | 655.36 | 577 / 578 | 100% | 7.06 | 1155 / 1155 |
| bladder | 100% | 530.67 | 21 / 21 | 100% | 4.74 | 503 / 504 |
| kidney | 100% | 470.27 | 89 / 89 | 100% | 6.21 | 897 / 901 |
| esophagus | 99% | 376.63 | 1437 / 1445 | 99% | 4.74 | 182 / 183 |
| skin | 99% | 525.00 | 1789 / 1809 | 100% | 8.25 | 472 / 472 |
| intestine | 100% | 413.16 | 966 / 966 | 98% | 3.28 | 519 / 527 |
| stomach | 98% | 299.00 | 353 / 359 | 100% | 3.92 | 285 / 286 |
| pancreas | 88% | 164.85 | 289 / 328 | 99% | 5.01 | 177 / 178 |
| liver | 86% | 151.96 | 195 / 226 | 100% | 4.55 | 406 / 406 |
| adipose | 100% | 673.76 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 6.04 | 29 / 29 |
| spleen | 100% | 569.92 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 3.71 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 2.91 | 1 / 1 |
| blood vessel | 100% | 534.46 | 1332 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 99% | 9.02 | 79 / 80 |
| muscle | 93% | 211.56 | 746 / 803 | 0% | 0 | 0 / 0 |
| heart | 90% | 215.78 | 776 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 61% | 115.17 | 563 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0015813 | Biological process | L-glutamate transmembrane transport |
| GO_0006868 | Biological process | glutamine transport |
| GO_0003333 | Biological process | amino acid transmembrane transport |
| GO_0045202 | Cellular component | synapse |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0015186 | Molecular function | L-glutamine transmembrane transporter activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0005313 | Molecular function | L-glutamate transmembrane transporter activity |
| Gene name | SLC38A6 |
| Protein name | Solute carrier family 38 member 6 Solute carrier family 38 member 6 (Amino acid transporter SLC38A6) (N-system amino acid transporter 1) (NAT-1) |
| Synonyms | NAT1 SNAT6 |
| Description | FUNCTION: Amino acid transporter with an apparent selectivity for L-glutamine and L-glutamate. May facilitate glutamine uptake in excitatory neurons. The transport mechanism remains to be elucidated. . |
| Accessions | E9PM79 ENST00000533744.6 E9PMA3 ENST00000354886.6 [Q8IZM9-2] ENST00000526105.5 H0YE10 ENST00000534758.1 H0YJ85 ENST00000529212.1 ENST00000526539.2 A0A087WZP5 A0A8V8TRG7 H0YF42 Q8IZM9 ENST00000529345.6 A0A0C4DG39 ENST00000267488.9 [Q8IZM9-1] ENST00000491344.7 ENST00000703134.1 ENST00000527591.5 ENST00000524402.6 ENST00000525723.6 ENST00000528350.5 H0YDY0 H0YJG2 ENST00000451406.5 H0YJU1 H0YEH3 G3V3H5 |