Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 20 studies | 57% ± 21% | |
oligodendrocyte precursor cell | 16 studies | 79% ± 18% | |
GABAergic neuron | 11 studies | 63% ± 23% | |
glutamatergic neuron | 11 studies | 60% ± 16% | |
neuron | 7 studies | 32% ± 16% | |
interneuron | 6 studies | 68% ± 22% | |
Mueller cell | 5 studies | 57% ± 24% | |
endothelial cell | 4 studies | 42% ± 20% | |
pericyte | 4 studies | 37% ± 24% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 62% ± 9% | |
GABAergic interneuron | 3 studies | 70% ± 5% | |
glial cell | 3 studies | 69% ± 6% | |
microglial cell | 3 studies | 38% ± 16% | |
retinal bipolar neuron | 3 studies | 45% ± 25% | |
amacrine cell | 3 studies | 50% ± 19% | |
glycinergic amacrine cell | 3 studies | 42% ± 4% | |
retina horizontal cell | 3 studies | 32% ± 13% | |
rod bipolar cell | 3 studies | 62% ± 26% | |
abnormal cell | 3 studies | 24% ± 7% | |
Schwann cell | 3 studies | 56% ± 29% | |
oligodendrocyte | 3 studies | 31% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 2225.60 | 2603 / 2642 | 100% | 53.29 | 703 / 705 |
prostate | 52% | 223.79 | 128 / 245 | 52% | 1.52 | 260 / 502 |
intestine | 70% | 675.60 | 678 / 966 | 8% | 0.15 | 43 / 527 |
uterus | 65% | 277.12 | 111 / 170 | 11% | 0.86 | 52 / 459 |
esophagus | 60% | 358.29 | 864 / 1445 | 8% | 0.21 | 15 / 183 |
skin | 1% | 3.21 | 24 / 1809 | 64% | 11.60 | 301 / 472 |
kidney | 11% | 26.85 | 10 / 89 | 50% | 1.72 | 452 / 901 |
adrenal gland | 21% | 88.36 | 53 / 258 | 39% | 2.05 | 90 / 230 |
heart | 55% | 289.40 | 476 / 861 | 0% | 0 | 0 / 0 |
thymus | 24% | 68.43 | 157 / 653 | 30% | 1.29 | 181 / 605 |
stomach | 32% | 170.10 | 116 / 359 | 15% | 0.61 | 43 / 286 |
bladder | 33% | 104.33 | 7 / 21 | 6% | 0.19 | 31 / 504 |
adipose | 35% | 118.20 | 421 / 1204 | 0% | 0 | 0 / 0 |
breast | 24% | 78.71 | 109 / 459 | 7% | 0.21 | 74 / 1118 |
blood vessel | 25% | 92.18 | 331 / 1335 | 0% | 0 | 0 / 0 |
spleen | 24% | 104.71 | 59 / 241 | 0% | 0 | 0 / 0 |
pancreas | 1% | 2.08 | 2 / 328 | 22% | 0.74 | 40 / 178 |
ovary | 9% | 36.43 | 16 / 180 | 13% | 0.47 | 56 / 430 |
eye | 0% | 0 | 0 / 0 | 13% | 0.52 | 10 / 80 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.45 | 4 / 45 |
lung | 0% | 0.90 | 2 / 578 | 7% | 0.26 | 83 / 1155 |
muscle | 5% | 21.75 | 37 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.04 | 1 / 29 |
liver | 0% | 0 | 0 / 226 | 1% | 0.10 | 5 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0055085 | Biological process | transmembrane transport |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0022857 | Molecular function | transmembrane transporter activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SLC35F1 |
Protein name | Solute carrier family 35 member F1 |
Synonyms | C6orf169 |
Description | FUNCTION: Putative solute transporter. . |
Accessions | ENST00000360388.9 [Q5T1Q4-1] ENST00000621341.1 [Q5T1Q4-2] Q5T1Q4 |