SLC23A1 | OmnibusX

Name	Number of supported studies	Average coverage
ciliated cell	5 studies	27% ± 12%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of SLC23A1 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	1393.28	226 / 226	95%	21.70	387 / 406
prostate	98%	387.39	241 / 245	97%	13.80	486 / 502
kidney	100%	1239.24	89 / 89	81%	12.46	726 / 901
breast	96%	47.63	439 / 459	37%	1.88	410 / 1118
ovary	99%	58.32	178 / 180	25%	1.70	106 / 430
stomach	86%	34.20	310 / 359	33%	1.61	94 / 286
intestine	88%	706.73	850 / 966	30%	1.39	160 / 527
pancreas	99%	75.07	324 / 328	18%	0.87	32 / 178
lung	98%	107.66	566 / 578	13%	0.69	149 / 1155
uterus	96%	119.88	163 / 170	14%	1.16	64 / 459
thymus	97%	48.65	635 / 653	11%	0.79	65 / 605
spleen	100%	166.05	241 / 241	0%	0	0 / 0
skin	94%	119.00	1698 / 1809	1%	0.02	3 / 472
esophagus	79%	27.85	1136 / 1445	10%	1.07	19 / 183
bladder	71%	26.52	15 / 21	17%	0.97	87 / 504
adrenal gland	85%	27.24	219 / 258	0%	0.23	1 / 230
adipose	84%	31.11	1014 / 1204	0%	0	0 / 0
peripheral blood	67%	77.42	619 / 929	0%	0	0 / 0
brain	64%	29.65	1678 / 2642	0%	0.01	2 / 705
blood vessel	55%	16.34	739 / 1335	0%	0	0 / 0
heart	41%	10.14	352 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	28%	1.62	8 / 29
muscle	17%	3.72	136 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	2%	0.14	1 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0015882	Biological process	L-ascorbic acid transmembrane transport
GO_0030324	Biological process	lung development
GO_0015851	Biological process	nucleobase transport
GO_0015747	Biological process	urate transport
GO_0019852	Biological process	L-ascorbic acid metabolic process
GO_0070837	Biological process	dehydroascorbic acid transport
GO_0006814	Biological process	sodium ion transport
GO_0007420	Biological process	brain development
GO_0009636	Biological process	response to toxic substance
GO_0035725	Biological process	sodium ion transmembrane transport
GO_0016324	Cellular component	apical plasma membrane
GO_0005886	Cellular component	plasma membrane
GO_0043229	Cellular component	intracellular organelle
GO_0070062	Cellular component	extracellular exosome
GO_0009925	Cellular component	basal plasma membrane
GO_0005737	Cellular component	cytoplasm
GO_0015205	Molecular function	nucleobase transmembrane transporter activity
GO_0008520	Molecular function	L-ascorbate:sodium symporter activity
GO_0015229	Molecular function	L-ascorbic acid transmembrane transporter activity
GO_0015143	Molecular function	urate transmembrane transporter activity
GO_0015081	Molecular function	sodium ion transmembrane transporter activity
GO_0033300	Molecular function	dehydroascorbic acid transmembrane transporter activity
GO_0005215	Molecular function	transporter activity
GO_0005515	Molecular function	protein binding

Gene name	SLC23A1
Protein name	Solute carrier family 23 member 1 Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
Synonyms	SVCT1 YSPL3
Description	FUNCTION: Sodium:ascorbate cotransporter. Mediates electrogenic uptake of vitamin C, with a stoichiometry of 2 Na(+) for each ascorbate . Has retained some ancestral activity toward nucleobases such as urate, an oxidized purine. Low-affinity high-capacity sodium:urate cotransporter, may regulate serum urate levels by serving as a renal urate re-absorber . .; FUNCTION: [Isoform 2]: Inactive transporter. .
Accessions	ENST00000348729.8 [Q9UHI7-1] H0Y902 ENST00000504513.1 H0YAJ1 ENST00000353963.7 [Q9UHI7-2] Q9UHI7 ENST00000508270.1

SLC23A1 report