SLC12A4 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of SLC12A4 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	9414.80	653 / 653	100%	34.27	603 / 605
skin	100%	5473.59	1809 / 1809	100%	28.76	470 / 472
kidney	100%	3930.09	89 / 89	99%	33.80	892 / 901
uterus	100%	9202.75	170 / 170	98%	22.27	451 / 459
lung	100%	9027.81	578 / 578	97%	19.03	1124 / 1155
prostate	100%	7899.31	244 / 245	97%	19.44	486 / 502
breast	100%	7669.84	459 / 459	96%	16.80	1076 / 1118
bladder	100%	6719.67	21 / 21	96%	19.27	485 / 504
esophagus	98%	6508.07	1413 / 1445	98%	18.97	180 / 183
adrenal gland	100%	6720.49	258 / 258	95%	19.87	219 / 230
pancreas	96%	2666.56	314 / 328	98%	24.73	174 / 178
intestine	99%	5785.79	955 / 966	90%	12.53	476 / 527
stomach	98%	3870.62	351 / 359	91%	13.16	260 / 286
ovary	100%	5808.91	180 / 180	88%	11.40	380 / 430
liver	94%	2143.50	213 / 226	93%	13.44	376 / 406
brain	78%	1495.97	2050 / 2642	100%	49.10	705 / 705
adipose	100%	7697.26	1204 / 1204	0%	0	0 / 0
blood vessel	100%	9865.85	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	52.21	80 / 80
spleen	100%	3805.44	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	17.38	45 / 45
ureter	0%	0	0 / 0	100%	10.19	1 / 1
heart	100%	6423.06	859 / 861	0%	0	0 / 0
muscle	97%	2972.57	782 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	97%	12.94	28 / 29
peripheral blood	37%	818.22	344 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0006811	Biological process	monoatomic ion transport
GO_0140157	Biological process	ammonium import across plasma membrane
GO_0055064	Biological process	chloride ion homeostasis
GO_1902476	Biological process	chloride transmembrane transport
GO_0006884	Biological process	cell volume homeostasis
GO_0007268	Biological process	chemical synaptic transmission
GO_0055075	Biological process	potassium ion homeostasis
GO_1990573	Biological process	potassium ion import across plasma membrane
GO_0071805	Biological process	potassium ion transmembrane transport
GO_0045202	Cellular component	synapse
GO_0016020	Cellular component	membrane
GO_0005886	Cellular component	plasma membrane
GO_0005765	Cellular component	lysosomal membrane
GO_0019901	Molecular function	protein kinase binding
GO_0005515	Molecular function	protein binding
GO_0015379	Molecular function	potassium:chloride symporter activity
GO_0005524	Molecular function	ATP binding
GO_0008519	Molecular function	ammonium channel activity

Gene name	SLC12A4
Protein name	Solute carrier family 12 member 4 (Electroneutral potassium-chloride cotransporter 1) (Erythroid K-Cl cotransporter 1) (hKCC1) Solute carrier family 12 member 4 Solute carrier family 12 (Potassium/chloride transporters), member 4, isoform CRA_e (cDNA FLJ40489 fis, clone TESTI2044194, highly similar to Solute carrier family 12 member 4)
Synonyms	hCG_2039906 KCC1
Description	FUNCTION: Mediates electroneutral potassium-chloride cotransport when activated by cell swelling. May contribute to cell volume homeostasis in single cells . May be involved in the regulation of basolateral Cl(-) exit in NaCl absorbing epithelia (By similarity). .; FUNCTION: [Isoform 4]: No transporter activity. .
Accessions	J3QRE2 ENST00000705485.1 ENST00000570616.1 J3QKM4 I3L1N8 Q9UP95 ENST00000575857.3 I3L4N6 B3KUS0 A0A994J5J8 ENST00000572037.5 J3QSF2 ENST00000576616.5 [Q9UP95-2] ENST00000541864.7 [Q9UP95-5] ENST00000316341.8 [Q9UP95-1] ENST00000576377.2 ENST00000571299.5 ENST00000537830.6 [Q9UP95-6]

SLC12A4 report