Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 36% ± 8% | |
fibroblast | 3 studies | 28% ± 7% | |
dendritic cell | 3 studies | 21% ± 4% | |
abnormal cell | 3 studies | 22% ± 4% | |
erythrocyte | 3 studies | 26% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
liver | 3 studies | 27% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3664.05 | 1445 / 1445 | 100% | 164.41 | 183 / 183 |
liver | 100% | 8252.21 | 226 / 226 | 100% | 234.08 | 406 / 406 |
ovary | 100% | 3543.81 | 180 / 180 | 100% | 185.22 | 430 / 430 |
prostate | 100% | 3128.15 | 245 / 245 | 100% | 126.80 | 501 / 502 |
skin | 100% | 5017.64 | 1809 / 1809 | 100% | 152.66 | 471 / 472 |
uterus | 100% | 3982.71 | 170 / 170 | 100% | 143.39 | 458 / 459 |
stomach | 100% | 2733.19 | 359 / 359 | 100% | 214.46 | 285 / 286 |
intestine | 100% | 3218.22 | 966 / 966 | 100% | 218.77 | 525 / 527 |
bladder | 100% | 3682.95 | 21 / 21 | 99% | 150.32 | 501 / 504 |
thymus | 100% | 2619.61 | 653 / 653 | 99% | 90.63 | 601 / 605 |
lung | 100% | 2323.50 | 577 / 578 | 99% | 121.97 | 1147 / 1155 |
brain | 99% | 1968.74 | 2621 / 2642 | 100% | 95.34 | 703 / 705 |
pancreas | 100% | 2019.01 | 328 / 328 | 99% | 81.71 | 176 / 178 |
adrenal gland | 100% | 4079.71 | 258 / 258 | 99% | 104.95 | 227 / 230 |
breast | 100% | 3165.43 | 459 / 459 | 99% | 112.53 | 1102 / 1118 |
kidney | 100% | 1966.20 | 89 / 89 | 97% | 61.78 | 875 / 901 |
adipose | 100% | 3130.80 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3661.69 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 137.60 | 80 / 80 |
spleen | 100% | 1991.27 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 132.80 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 130.18 | 1 / 1 |
heart | 96% | 1682.56 | 829 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 68.62 | 26 / 29 |
peripheral blood | 84% | 1186.68 | 777 / 929 | 0% | 0 | 0 / 0 |
muscle | 79% | 769.28 | 637 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0070207 | Biological process | protein homotrimerization |
GO_0043523 | Biological process | regulation of neuron apoptotic process |
GO_0038003 | Biological process | G protein-coupled opioid receptor signaling pathway |
GO_0007399 | Biological process | nervous system development |
GO_0006869 | Biological process | lipid transport |
GO_0098839 | Cellular component | postsynaptic density membrane |
GO_0005811 | Cellular component | lipid droplet |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005637 | Cellular component | nuclear inner membrane |
GO_0005640 | Cellular component | nuclear outer membrane |
GO_0005635 | Cellular component | nuclear envelope |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0070161 | Cellular component | anchoring junction |
GO_0014069 | Cellular component | postsynaptic density |
GO_0030426 | Cellular component | growth cone |
GO_0004985 | Molecular function | G protein-coupled opioid receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SIGMAR1 |
Protein name | Sigma non-opioid intracellular receptor 1 (Sigma 1-type opioid receptor) Sigma non-opioid intracellular receptor 1 (Aging-associated gene 8 protein) (SR31747-binding protein) (SR-BP) (Sigma 1-type opioid receptor) (SIG-1R) (Sigma1-receptor) (Sigma1R) (hSigmaR1) |
Synonyms | OPRS1 hCG_20471 AAG8 SRBP |
Description | FUNCTION: Functions in lipid transport from the endoplasmic reticulum and is involved in a wide array of cellular functions probably through regulation of the biogenesis of lipid microdomains at the plasma membrane. Involved in the regulation of different receptors it plays a role in BDNF signaling and EGF signaling. Also regulates ion channels like the potassium channel and could modulate neurotransmitter release. Plays a role in calcium signaling through modulation together with ANK2 of the ITP3R-dependent calcium efflux at the endoplasmic reticulum. Plays a role in several other cell functions including proliferation, survival and death. Originally identified for its ability to bind various psychoactive drugs it is involved in learning processes, memory and mood alteration . Necessary for proper mitochondrial axonal transport in motor neurons, in particular the retrograde movement of mitochondria. Plays a role in protecting cells against oxidative stress-induced cell death via its interaction with RNF112 (By similarity). . FUNCTION: Functions in lipid transport from the endoplasmic reticulum and is involved in a wide array of cellular functions probably through regulation of the biogenesis of lipid microdomains at the plasma membrane. Regulates calcium efflux at the endoplasmic reticulum. . FUNCTION: Functions in lipid transport from the endoplasmic reticulum and is involved in a wide array of cellular functions probably through regulation of the biogenesis of lipid microdomains at the plasma membrane. Regulates calcium efflux at the endoplasmic reticulum. . FUNCTION: Functions in lipid transport from the endoplasmic reticulum and is involved in a wide array of cellular functions probably through regulation of the biogenesis of lipid microdomains at the plasma membrane. Regulates calcium efflux at the endoplasmic reticulum. . FUNCTION: Functions in lipid transport from the endoplasmic reticulum and is involved in a wide array of cellular functions probably through regulation of the biogenesis of lipid microdomains at the plasma membrane. Regulates calcium efflux at the endoplasmic reticulum. . FUNCTION: Functions in lipid transport from the endoplasmic reticulum and is involved in a wide array of cellular functions probably through regulation of the biogenesis of lipid microdomains at the plasma membrane. Regulates calcium efflux at the endoplasmic reticulum. . |
Accessions | B4DR71 ENST00000680730.1 ENST00000353468.4 [Q99720-4] A0A7P0T9D5 ENST00000680244.1 ENST00000277010.9 [Q99720-1] Q5T1J1 A0A7P0TA12 A0A7P0Z4C2 ENST00000680277.1 ENST00000679597.1 [Q99720-2] ENST00000680104.1 Q99720 ENST00000378892.5 ENST00000477726.1 [Q99720-3] |