SHROOM1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	5 studies	24% ± 5%	Explore
epithelial cell	3 studies	19% ± 3%	Explore
hepatocyte	3 studies	43% ± 26%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	14063.02	245 / 245	100%	88.62	502 / 502
liver	100%	11320.40	226 / 226	99%	50.87	402 / 406
intestine	99%	2528.01	960 / 966	99%	32.32	520 / 527
pancreas	100%	1704.26	328 / 328	96%	25.01	171 / 178
stomach	98%	1507.19	353 / 359	95%	27.44	273 / 286
bladder	100%	11609.95	21 / 21	93%	32.81	469 / 504
esophagus	99%	912.64	1429 / 1445	91%	17.40	166 / 183
ovary	99%	959.48	179 / 180	88%	17.08	379 / 430
uterus	100%	2364.68	170 / 170	87%	15.34	401 / 459
brain	100%	2056.58	2636 / 2642	85%	14.02	600 / 705
thymus	100%	1342.50	651 / 653	85%	10.50	512 / 605
breast	100%	1530.44	459 / 459	77%	53.89	856 / 1118
lung	100%	1975.98	578 / 578	76%	11.98	874 / 1155
kidney	100%	1348.24	89 / 89	73%	10.46	658 / 901
adrenal gland	63%	331.88	163 / 258	81%	14.42	186 / 230
skin	46%	272.70	824 / 1809	64%	8.64	304 / 472
ureter	0%	0	0 / 0	100%	16.74	1 / 1
adipose	100%	1271.02	1200 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	94%	14.60	75 / 80
heart	92%	604.39	790 / 861	0%	0	0 / 0
blood vessel	83%	538.56	1109 / 1335	0%	0	0 / 0
spleen	71%	351.80	171 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	53%	5.09	24 / 45
peripheral blood	26%	156.95	245 / 929	0%	0	0 / 0
lymph node	0%	0	0 / 0	21%	2.22	6 / 29
muscle	9%	36.93	75 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0