Insufficient scRNA-seq data for expression of SHOX at single-cell level.
Insufficient scRNA-seq data for expression of SHOX at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
muscle | 84% | 63.05 | 672 / 803 | 0% | 0 | 0 / 0 |
adipose | 79% | 136.93 | 952 / 1204 | 0% | 0 | 0 / 0 |
breast | 67% | 54.50 | 308 / 459 | 0% | 0 | 0 / 1118 |
skin | 56% | 34.14 | 1006 / 1809 | 0% | 0.00 | 1 / 472 |
blood vessel | 42% | 51.96 | 564 / 1335 | 0% | 0 | 0 / 0 |
intestine | 41% | 8.92 | 398 / 966 | 0% | 0.00 | 1 / 527 |
esophagus | 9% | 1.64 | 128 / 1445 | 1% | 0.01 | 1 / 183 |
prostate | 9% | 1.93 | 23 / 245 | 0% | 0 | 0 / 502 |
brain | 5% | 1.10 | 134 / 2642 | 0% | 0.01 | 2 / 705 |
heart | 5% | 1.19 | 45 / 861 | 0% | 0 | 0 / 0 |
thymus | 5% | 0.79 | 32 / 653 | 0% | 0 | 0 / 605 |
adrenal gland | 1% | 0.11 | 2 / 258 | 3% | 0.15 | 8 / 230 |
stomach | 3% | 0.45 | 9 / 359 | 1% | 0.02 | 4 / 286 |
pancreas | 1% | 0.12 | 3 / 328 | 1% | 0.01 | 1 / 178 |
kidney | 1% | 0.10 | 1 / 89 | 0% | 0.02 | 2 / 901 |
lung | 0% | 0.04 | 2 / 578 | 1% | 0.03 | 9 / 1155 |
bladder | 0% | 0 | 0 / 21 | 1% | 0.10 | 5 / 504 |
uterus | 1% | 0.07 | 1 / 170 | 0% | 0.33 | 1 / 459 |
ovary | 1% | 0.07 | 1 / 180 | 0% | 0 | 0 / 430 |
peripheral blood | 1% | 0.07 | 5 / 929 | 0% | 0 | 0 / 0 |
spleen | 0% | 0.05 | 1 / 241 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0 | 0 / 406 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0001501 | Biological process | skeletal system development |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0043565 | Molecular function | sequence-specific DNA binding |
Gene name | SHOX |
Protein name | Short stature homeobox protein (Pseudoautosomal homeobox-containing osteogenic protein) (Short stature homeobox-containing protein) |
Synonyms | PHOG |
Description | FUNCTION: Controls fundamental aspects of growth and development. |
Accessions | ENST00000381578.6 [O15266-1] ENST00000711141.1 [O15266-2] ENST00000711142.1 [O15266-1] ENST00000381575.6 [O15266-2] ENST00000334060.8 [O15266-2] ENST00000686671.1 [O15266-1] ENST00000711143.1 [O15266-2] O15266 ENST00000711145.1 [O15266-1] |