SHISAL2A report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
naive B cell	4 studies	19% ± 2%	Explore
B cell	3 studies	19% ± 3%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	97%	51.57	636 / 653	49%	1.21	299 / 605
lung	97%	43.85	562 / 578	40%	0.91	467 / 1155
brain	82%	33.56	2156 / 2642	34%	0.84	240 / 705
uterus	62%	21.62	106 / 170	48%	1.38	222 / 459
kidney	61%	23.08	54 / 89	45%	1.02	401 / 901
breast	66%	14.67	302 / 459	35%	0.73	391 / 1118
lymph node	0%	0	0 / 0	100%	17.97	29 / 29
spleen	100%	304.33	241 / 241	0%	0	0 / 0
peripheral blood	99%	265.57	916 / 929	0%	0	0 / 0
prostate	82%	25.96	200 / 245	7%	0.12	33 / 502
tonsil	0%	0	0 / 0	78%	1.96	35 / 45
stomach	47%	9.75	169 / 359	30%	0.94	86 / 286
adrenal gland	64%	12.29	166 / 258	12%	0.28	28 / 230
pancreas	23%	3.70	74 / 328	51%	1.30	90 / 178
adipose	72%	17.65	872 / 1204	0%	0	0 / 0
intestine	57%	72.59	546 / 966	15%	0.55	77 / 527
bladder	48%	14.52	10 / 21	22%	0.62	110 / 504
liver	37%	6.19	83 / 226	18%	1.11	72 / 406
ovary	25%	3.66	45 / 180	24%	0.38	103 / 430
esophagus	27%	5.88	391 / 1445	22%	0.59	40 / 183
blood vessel	47%	11.02	630 / 1335	0%	0	0 / 0
muscle	42%	9.67	340 / 803	0%	0	0 / 0
skin	14%	1.99	256 / 1809	24%	0.71	114 / 472
heart	19%	3.58	161 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	3%	0.03	2 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1