SHISA9 | OmnibusX

Name	Number of supported studies	Average coverage
oligodendrocyte precursor cell	14 studies	55% ± 16%	Explore
glutamatergic neuron	11 studies	65% ± 24%	Explore
GABAergic neuron	10 studies	52% ± 19%	Explore
neuron	6 studies	28% ± 9%	Explore
astrocyte	5 studies	35% ± 17%	Explore
interneuron	4 studies	56% ± 30%	Explore
endothelial cell	3 studies	42% ± 19%	Explore
GABAergic interneuron	3 studies	47% ± 17%	Explore
glial cell	3 studies	32% ± 13%	Explore

Name	Number of supported studies	Average coverage
brain	14 studies	41% ± 22%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	85%	1283.12	2246 / 2642	83%	8.27	586 / 705
kidney	62%	187.60	55 / 89	75%	5.57	673 / 901
prostate	84%	465.67	207 / 245	43%	2.16	217 / 502
intestine	77%	550.87	746 / 966	14%	0.74	76 / 527
breast	18%	37.51	82 / 459	58%	3.11	648 / 1118
esophagus	60%	229.55	873 / 1445	9%	0.43	16 / 183
ovary	1%	0.86	1 / 180	55%	2.90	237 / 430
stomach	32%	114.07	115 / 359	10%	0.43	30 / 286
adrenal gland	19%	65.77	49 / 258	23%	1.38	54 / 230
skin	34%	356.58	610 / 1809	3%	0.31	16 / 472
heart	19%	32.92	167 / 861	0%	0	0 / 0
bladder	5%	5.76	1 / 21	12%	0.52	58 / 504
uterus	1%	1.86	2 / 170	14%	0.69	62 / 459
lung	0%	0.20	1 / 578	12%	0.88	134 / 1155
thymus	2%	2.61	13 / 653	8%	0.23	47 / 605
pancreas	3%	5.82	11 / 328	3%	0.27	6 / 178
liver	0%	0	0 / 226	7%	0.40	27 / 406
blood vessel	2%	4.06	30 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	2%	0.08	1 / 45
eye	0%	0	0 / 0	1%	0.01	1 / 80
adipose	0%	0.45	4 / 1204	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0048172	Biological process	regulation of short-term neuronal synaptic plasticity
GO_2000311	Biological process	regulation of AMPA receptor activity
GO_0098978	Cellular component	glutamatergic synapse
GO_0098839	Cellular component	postsynaptic density membrane
GO_0045202	Cellular component	synapse
GO_0032281	Cellular component	AMPA glutamate receptor complex
GO_0014069	Cellular component	postsynaptic density
GO_0032591	Cellular component	dendritic spine membrane
GO_0045211	Cellular component	postsynaptic membrane
GO_0008328	Cellular component	ionotropic glutamate receptor complex
GO_0030165	Molecular function	PDZ domain binding

Gene name	SHISA9
Protein name	Protein shisa-9
Synonyms
Description	FUNCTION: Regulator of short-term neuronal synaptic plasticity in the dentate gyrus. Associates with AMPA receptors (ionotropic glutamate receptors) in synaptic spines and promotes AMPA receptor desensitization at excitatory synapses (By similarity). .
Accessions	ENST00000423335.2 [B4DS77-3] B4DS77 ENST00000558583.3 [B4DS77-1]

SHISA9 report