SHISA2 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
connective tissue cell	3 studies	18% ± 3%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	1376.69	653 / 653	96%	69.10	578 / 605
breast	86%	213.44	395 / 459	65%	49.29	722 / 1118
lung	73%	207.29	420 / 578	55%	21.48	636 / 1155
kidney	100%	538.34	89 / 89	21%	4.80	188 / 901
stomach	79%	89.75	283 / 359	38%	5.02	109 / 286
skin	54%	85.47	969 / 1809	62%	44.49	292 / 472
pancreas	22%	12.70	72 / 328	72%	9.87	128 / 178
muscle	91%	316.27	727 / 803	0%	0	0 / 0
prostate	61%	77.22	150 / 245	29%	4.41	146 / 502
adipose	76%	68.03	913 / 1204	0%	0	0 / 0
brain	69%	121.39	1834 / 2642	4%	0.80	26 / 705
tonsil	0%	0	0 / 0	56%	22.84	25 / 45
esophagus	14%	11.97	196 / 1445	38%	20.22	70 / 183
intestine	23%	16.16	222 / 966	26%	3.19	139 / 527
ovary	28%	36.19	51 / 180	20%	1.99	87 / 430
bladder	14%	9.24	3 / 21	34%	13.24	172 / 504
uterus	4%	1.94	6 / 170	31%	10.95	140 / 459
spleen	14%	8.70	34 / 241	0%	0	0 / 0
blood vessel	10%	7.49	140 / 1335	0%	0	0 / 0
heart	8%	5.36	66 / 861	0%	0	0 / 0
adrenal gland	2%	0.58	4 / 258	1%	0.23	2 / 230
liver	0%	0.15	1 / 226	2%	0.20	8 / 406
peripheral blood	1%	0.81	9 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1