Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 10 studies | 38% ± 14% | |
GABAergic neuron | 9 studies | 37% ± 14% | |
neuron | 8 studies | 40% ± 14% | |
interneuron | 6 studies | 39% ± 19% | |
amacrine cell | 5 studies | 52% ± 18% | |
retinal rod cell | 5 studies | 33% ± 14% | |
pancreatic A cell | 4 studies | 59% ± 9% | |
type B pancreatic cell | 4 studies | 44% ± 8% | |
retinal ganglion cell | 4 studies | 84% ± 14% | |
retina horizontal cell | 4 studies | 47% ± 16% | |
oligodendrocyte | 4 studies | 26% ± 6% | |
pancreatic D cell | 3 studies | 48% ± 9% | |
retinal bipolar neuron | 3 studies | 53% ± 11% | |
GABAergic interneuron | 3 studies | 25% ± 11% | |
glycinergic amacrine cell | 3 studies | 29% ± 11% | |
retinal cone cell | 3 studies | 65% ± 12% | |
epithelial cell | 3 studies | 46% ± 8% | |
OFF-bipolar cell | 3 studies | 47% ± 22% | |
ON-bipolar cell | 3 studies | 51% ± 25% | |
rod bipolar cell | 3 studies | 45% ± 13% | |
abnormal cell | 3 studies | 27% ± 6% | |
enteroendocrine cell | 3 studies | 39% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 2054.02 | 328 / 328 | 97% | 94.96 | 173 / 178 |
adrenal gland | 96% | 2644.87 | 247 / 258 | 98% | 430.24 | 225 / 230 |
brain | 98% | 8521.49 | 2598 / 2642 | 87% | 103.65 | 615 / 705 |
prostate | 81% | 1442.75 | 199 / 245 | 98% | 137.31 | 491 / 502 |
stomach | 75% | 1660.35 | 268 / 359 | 88% | 60.94 | 251 / 286 |
kidney | 66% | 997.61 | 59 / 89 | 82% | 83.40 | 741 / 901 |
ovary | 42% | 764.48 | 76 / 180 | 90% | 79.78 | 389 / 430 |
breast | 46% | 655.17 | 209 / 459 | 77% | 71.80 | 863 / 1118 |
intestine | 33% | 329.27 | 323 / 966 | 86% | 58.81 | 453 / 527 |
lung | 35% | 373.45 | 204 / 578 | 79% | 63.66 | 917 / 1155 |
uterus | 42% | 684.12 | 72 / 170 | 69% | 49.67 | 318 / 459 |
skin | 33% | 731.44 | 602 / 1809 | 63% | 60.88 | 299 / 472 |
eye | 0% | 0 | 0 / 0 | 94% | 74.45 | 75 / 80 |
esophagus | 1% | 8.71 | 13 / 1445 | 77% | 59.54 | 141 / 183 |
bladder | 10% | 81.05 | 2 / 21 | 66% | 39.22 | 333 / 504 |
tonsil | 0% | 0 | 0 / 0 | 64% | 31.24 | 29 / 45 |
thymus | 2% | 16.54 | 12 / 653 | 48% | 25.23 | 293 / 605 |
liver | 0% | 0 | 0 / 226 | 42% | 32.43 | 171 / 406 |
adipose | 23% | 278.74 | 278 / 1204 | 0% | 0 | 0 / 0 |
spleen | 9% | 75.26 | 22 / 241 | 0% | 0 | 0 / 0 |
heart | 3% | 31.33 | 28 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 2% | 21.52 | 23 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0090036 | Biological process | regulation of protein kinase C signaling |
GO_0060074 | Biological process | synapse maturation |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0043025 | Cellular component | neuronal cell body |
GO_0005886 | Cellular component | plasma membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
Gene name | SEZ6L2 |
Protein name | Seizure related 6-like protein 2 isoform A Seizure related 6 homolog like 2 Seizure related 6-like protein 2 isoform C Seizure related 6-like protein 2 isoform E Seizure related 6-like protein 2 isoform D Seizure related 6-like protein 2 isoform G Seizure 6-like protein 2 Seizure related 6-like protein 2 isoform H Seizure related 6-like protein 2 isoform F Seizure related 6-like protein 2 isoform B |
Synonyms | UNQ1903/PRO4349 PSK |
Description | FUNCTION: May contribute to specialized endoplasmic reticulum functions in neurons. . |
Accessions | ENST00000346932.9 [Q6UXD5-6] X5D2X2 ENST00000617533.5 X5D7P3 ENST00000350527.7 [Q6UXD5-3] ENST00000537485.5 [Q6UXD5-5] ENST00000563118.1 ENST00000308713.9 [Q6UXD5-1] H3BN26 I3L111 X5D9C2 X5DNZ5 X5D9G4 X5DRJ2 A0A087WYL5 ENST00000568380.1 X5DPB9 X5D2T7 Q6UXD5 |