Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 5 studies | 28% ± 12% | |
interneuron | 5 studies | 30% ± 16% | |
GABAergic neuron | 4 studies | 34% ± 14% | |
retinal ganglion cell | 3 studies | 48% ± 16% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 20% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 4918.89 | 2578 / 2642 | 100% | 78.05 | 702 / 705 |
adrenal gland | 3% | 13.21 | 8 / 258 | 66% | 20.38 | 151 / 230 |
pancreas | 0% | 0 | 0 / 328 | 26% | 4.72 | 47 / 178 |
ovary | 1% | 1.22 | 1 / 180 | 22% | 2.06 | 96 / 430 |
liver | 0% | 0 | 0 / 226 | 17% | 4.88 | 68 / 406 |
intestine | 3% | 8.21 | 29 / 966 | 5% | 0.55 | 27 / 527 |
prostate | 0% | 0 | 0 / 245 | 8% | 0.59 | 38 / 502 |
stomach | 0% | 0.82 | 1 / 359 | 7% | 0.94 | 19 / 286 |
breast | 0% | 0 | 0 / 459 | 7% | 2.11 | 74 / 1118 |
eye | 0% | 0 | 0 / 0 | 6% | 0.72 | 5 / 80 |
lung | 0% | 0 | 0 / 578 | 6% | 0.66 | 67 / 1155 |
esophagus | 0% | 0.15 | 1 / 1445 | 4% | 0.76 | 8 / 183 |
uterus | 0% | 0 | 0 / 170 | 4% | 0.11 | 20 / 459 |
bladder | 0% | 0 | 0 / 21 | 3% | 0.55 | 16 / 504 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.10 | 1 / 45 |
skin | 0% | 0.15 | 1 / 1809 | 1% | 0.45 | 7 / 472 |
kidney | 0% | 0 | 0 / 89 | 1% | 0.04 | 9 / 901 |
heart | 0% | 0.90 | 2 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.61 | 2 / 929 | 0% | 0 | 0 / 0 |
thymus | 0% | 0 | 0 / 653 | 0% | 0.01 | 1 / 605 |
muscle | 0% | 0.27 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adipose | 0% | 0 | 0 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0 | 0 / 1335 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008344 | Biological process | adult locomotory behavior |
GO_0090036 | Biological process | regulation of protein kinase C signaling |
GO_0050773 | Biological process | regulation of dendrite development |
GO_0021680 | Biological process | cerebellar Purkinje cell layer development |
GO_0060074 | Biological process | synapse maturation |
GO_0060079 | Biological process | excitatory postsynaptic potential |
GO_0097440 | Cellular component | apical dendrite |
GO_0043198 | Cellular component | dendritic shaft |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0043025 | Cellular component | neuronal cell body |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005886 | Cellular component | plasma membrane |
GO_0043197 | Cellular component | dendritic spine |
GO_0005515 | Molecular function | protein binding |
Gene name | SEZ6 |
Protein name | Seizure protein 6 homolog (SEZ-6) (hSEZ-6) Seizure related 6 homolog |
Synonyms | |
Description | FUNCTION: May play a role in cell-cell recognition and in neuronal membrane signaling. Seems to be important for the achievement of the necessary balance between dendrite elongation and branching during the elaboration of a complex dendritic arbor. Involved in the development of appropriate excitatory synaptic connectivity (By similarity). . |
Accessions | ENST00000535262.1 Q53EL9 ENST00000540632.6 H0YFT6 ENST00000442608.7 ENST00000540419.5 K7ELJ4 A0A0A0MSU7 H0YGK0 H0YF95 ENST00000360295.13 [Q53EL9-3] ENST00000539265.1 H0YFX0 ENST00000585644.1 ENST00000317338.17 [Q53EL9-1] |