Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 11 studies | 22% ± 7% | |
GABAergic neuron | 7 studies | 36% ± 20% | |
microglial cell | 6 studies | 26% ± 4% | |
astrocyte | 6 studies | 29% ± 7% | |
oligodendrocyte | 6 studies | 23% ± 6% | |
glutamatergic neuron | 5 studies | 50% ± 25% | |
fibroblast | 5 studies | 21% ± 5% | |
macrophage | 5 studies | 21% ± 4% | |
interneuron | 5 studies | 37% ± 21% | |
epithelial cell | 4 studies | 22% ± 10% | |
adipocyte | 4 studies | 19% ± 2% | |
oligodendrocyte precursor cell | 4 studies | 27% ± 5% | |
endothelial cell of lymphatic vessel | 4 studies | 18% ± 1% | |
smooth muscle cell | 4 studies | 20% ± 2% | |
pericyte | 3 studies | 20% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 8 studies | 34% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 680.62 | 21 / 21 | 100% | 9.65 | 504 / 504 |
esophagus | 100% | 656.51 | 1445 / 1445 | 100% | 8.96 | 183 / 183 |
ovary | 100% | 786.45 | 180 / 180 | 100% | 8.19 | 430 / 430 |
pancreas | 100% | 483.66 | 328 / 328 | 100% | 8.82 | 178 / 178 |
prostate | 100% | 798.77 | 245 / 245 | 100% | 9.52 | 502 / 502 |
uterus | 100% | 815.79 | 170 / 170 | 100% | 13.95 | 459 / 459 |
breast | 100% | 722.85 | 459 / 459 | 100% | 11.12 | 1117 / 1118 |
thymus | 100% | 825.94 | 653 / 653 | 100% | 10.84 | 604 / 605 |
lung | 100% | 628.17 | 577 / 578 | 100% | 10.78 | 1155 / 1155 |
liver | 100% | 465.59 | 226 / 226 | 100% | 6.43 | 405 / 406 |
kidney | 100% | 558.31 | 89 / 89 | 100% | 7.96 | 898 / 901 |
brain | 100% | 531.33 | 2630 / 2642 | 100% | 9.70 | 705 / 705 |
stomach | 100% | 482.96 | 359 / 359 | 99% | 6.56 | 283 / 286 |
intestine | 100% | 625.31 | 966 / 966 | 99% | 6.77 | 521 / 527 |
skin | 100% | 892.83 | 1809 / 1809 | 98% | 7.76 | 464 / 472 |
adrenal gland | 100% | 658.97 | 258 / 258 | 97% | 7.46 | 224 / 230 |
blood vessel | 100% | 697.05 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 9.38 | 29 / 29 |
spleen | 100% | 698.37 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 14.29 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.26 | 1 / 1 |
adipose | 100% | 706.83 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 99% | 381.11 | 851 / 861 | 0% | 0 | 0 / 0 |
muscle | 98% | 288.46 | 788 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 75% | 294.21 | 695 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 73% | 2.94 | 58 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0061025 | Biological process | membrane fusion |
GO_0015031 | Biological process | protein transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005484 | Molecular function | SNAP receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SEC22A |
Protein name | SEC22 homolog A, vesicle trafficking protein Vesicle-trafficking protein SEC22a (SEC22 vesicle-trafficking protein homolog A) (SEC22 vesicle-trafficking protein-like 2) |
Synonyms | SEC22L2 |
Description | FUNCTION: May be involved in vesicle transport between the ER and the Golgi complex. . FUNCTION: SNARE involved in targeting and fusion of ER-derived transport vesicles with the Golgi complex as well as Golgi-derived retrograde transport vesicles with the ER. . FUNCTION: SNARE involved in targeting and fusion of ER-derived transport vesicles with the Golgi complex as well as Golgi-derived retrograde transport vesicles with the ER. . FUNCTION: May be involved in vesicle transport between the ER and the Golgi complex. . FUNCTION: SNARE involved in targeting and fusion of ER-derived transport vesicles with the Golgi complex as well as Golgi-derived retrograde transport vesicles with the ER. . FUNCTION: May be involved in vesicle transport between the ER and the Golgi complex. . |
Accessions | C9JZ27 ENST00000480631.5 ENST00000491366.5 C9JRY4 ENST00000466950.5 C9JR77 Q96IW7 ENST00000492595.6 ENST00000481965.6 F8WAU7 ENST00000487572.5 ENST00000466519.5 ENST00000473494.6 C9JNZ0 ENST00000309934.4 C9JDJ8 C9J463 |