Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 3 studies | 24% ± 6% |
Insufficient scRNA-seq data for expression of SDHAF4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 655.35 | 2642 / 2642 | 100% | 29.30 | 704 / 705 |
thymus | 100% | 417.33 | 653 / 653 | 100% | 28.44 | 604 / 605 |
prostate | 100% | 433.69 | 245 / 245 | 100% | 34.08 | 501 / 502 |
intestine | 100% | 352.44 | 966 / 966 | 100% | 26.14 | 525 / 527 |
adrenal gland | 100% | 646.81 | 258 / 258 | 100% | 36.05 | 229 / 230 |
breast | 100% | 593.28 | 459 / 459 | 100% | 22.46 | 1113 / 1118 |
ovary | 99% | 343.44 | 179 / 180 | 100% | 32.76 | 430 / 430 |
bladder | 100% | 363.14 | 21 / 21 | 99% | 26.44 | 501 / 504 |
uterus | 100% | 372.80 | 170 / 170 | 99% | 21.74 | 456 / 459 |
kidney | 100% | 598.29 | 89 / 89 | 99% | 25.05 | 895 / 901 |
liver | 100% | 242.38 | 225 / 226 | 100% | 14.74 | 404 / 406 |
stomach | 100% | 300.60 | 359 / 359 | 98% | 20.82 | 281 / 286 |
pancreas | 99% | 207.50 | 324 / 328 | 99% | 19.08 | 177 / 178 |
lung | 98% | 316.96 | 567 / 578 | 100% | 22.50 | 1153 / 1155 |
esophagus | 100% | 343.54 | 1444 / 1445 | 98% | 12.91 | 179 / 183 |
skin | 100% | 469.80 | 1807 / 1809 | 97% | 17.19 | 460 / 472 |
adipose | 100% | 550.54 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 21.20 | 29 / 29 |
spleen | 100% | 314.72 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.37 | 1 / 1 |
blood vessel | 100% | 364.04 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 443.94 | 800 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 22.07 | 79 / 80 |
heart | 98% | 467.33 | 845 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 16.94 | 44 / 45 |
peripheral blood | 60% | 206.29 | 554 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034553 | Biological process | mitochondrial respiratory chain complex II assembly |
GO_0045333 | Biological process | cellular respiration |
GO_0045087 | Biological process | innate immune response |
GO_0005575 | Cellular component | cellular_component |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005739 | Cellular component | mitochondrion |
GO_0008047 | Molecular function | enzyme activator activity |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | SDHAF4 |
Protein name | Succinate dehydrogenase assembly factor 4, mitochondrial Succinate dehydrogenase assembly factor 4, mitochondrial (SDH assembly factor 4) (SDHAF4) |
Synonyms | C6orf57 |
Description | FUNCTION: Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol . Binds to the flavoprotein subunit SDHA in its FAD-bound form, blocking the generation of excess reactive oxygen species (ROS) and facilitating its assembly with the iron-sulfur protein subunit SDHB into the SDH catalytic dimer (By similarity). . |
Accessions | I6L976 ENST00000370474.4 Q5VUM1 |