SCML2 | OmnibusX

Name	Number of supported studies	Average coverage
GABAergic neuron	4 studies	22% ± 4%	Explore
glutamatergic neuron	3 studies	19% ± 1%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of SCML2 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	660.94	258 / 258	93%	4.16	215 / 230
ovary	100%	712.09	180 / 180	92%	3.65	395 / 430
brain	97%	125.43	2571 / 2642	92%	3.47	650 / 705
prostate	100%	207.93	245 / 245	79%	1.53	399 / 502
uterus	100%	412.55	170 / 170	78%	4.92	356 / 459
breast	100%	184.87	458 / 459	77%	3.38	862 / 1118
intestine	100%	258.30	964 / 966	69%	2.56	361 / 527
liver	98%	116.85	222 / 226	67%	2.17	273 / 406
thymus	100%	366.30	652 / 653	64%	1.68	386 / 605
esophagus	100%	186.40	1445 / 1445	62%	3.21	114 / 183
skin	100%	197.86	1806 / 1809	59%	2.56	278 / 472
lung	96%	98.12	554 / 578	57%	2.47	655 / 1155
bladder	100%	250.71	21 / 21	50%	2.04	254 / 504
stomach	79%	97.69	285 / 359	69%	2.98	196 / 286
kidney	100%	99.53	89 / 89	25%	0.53	226 / 901
pancreas	100%	130.95	327 / 328	21%	0.65	37 / 178
spleen	100%	177.04	241 / 241	0%	0	0 / 0
adipose	99%	152.34	1196 / 1204	0%	0	0 / 0
blood vessel	97%	139.54	1292 / 1335	0%	0	0 / 0
heart	91%	88.74	780 / 861	0%	0	0 / 0
muscle	85%	93.76	683 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	76%	4.32	34 / 45
eye	0%	0	0 / 0	57%	1.17	46 / 80
lymph node	0%	0	0 / 0	41%	1.36	12 / 29
peripheral blood	19%	13.24	179 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0045892	Biological process	negative regulation of DNA-templated transcription
GO_0009653	Biological process	anatomical structure morphogenesis
GO_0031519	Cellular component	PcG protein complex
GO_0005634	Cellular component	nucleus
GO_0005515	Molecular function	protein binding
GO_0042393	Molecular function	histone binding
GO_0003682	Molecular function	chromatin binding

Gene name	SCML2
Protein name	Scm polycomb group protein like 2 (cDNA FLJ60333, highly similar to Sex comb on midleg-like protein 2) Sex comb on midleg-like protein 2 Scm polycomb group protein like 2
Synonyms
Description	FUNCTION: Putative Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development (By similarity). .
Accessions	ENST00000398048.4 [Q9UQR0-2] ENST00000251900.9 [Q9UQR0-1] H0Y6S1 ENST00000420857.6 Q9UQR0 B4DRC2 ENST00000665583.1

SCML2 report