SCARA3 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
astrocyte	12 studies	35% ± 20%	Explore
myofibroblast cell	6 studies	35% ± 14%	Explore
fibroblast	4 studies	25% ± 7%	Explore
smooth muscle cell	3 studies	19% ± 3%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	96%	5382.37	2548 / 2642	99%	222.69	701 / 705
thymus	100%	8886.37	650 / 653	87%	160.05	526 / 605
ovary	77%	1988.41	139 / 180	98%	169.15	420 / 430
uterus	100%	12937.77	170 / 170	71%	56.17	325 / 459
prostate	100%	4281.25	244 / 245	62%	22.50	312 / 502
breast	83%	2571.40	383 / 459	75%	41.13	843 / 1118
esophagus	99%	4948.61	1431 / 1445	58%	30.39	107 / 183
bladder	100%	4691.05	21 / 21	41%	19.33	208 / 504
lung	91%	2419.04	524 / 578	49%	18.61	567 / 1155
skin	97%	2777.18	1751 / 1809	13%	5.46	62 / 472
blood vessel	100%	9880.89	1330 / 1335	0%	0	0 / 0
intestine	84%	3427.91	813 / 966	14%	5.84	75 / 527
adipose	88%	3721.03	1060 / 1204	0%	0	0 / 0
kidney	38%	982.61	34 / 89	41%	37.90	366 / 901
stomach	53%	1737.34	192 / 359	24%	9.71	68 / 286
pancreas	5%	76.69	17 / 328	69%	26.71	123 / 178
adrenal gland	51%	824.66	131 / 258	23%	7.71	54 / 230
tonsil	0%	0	0 / 0	58%	23.70	26 / 45
eye	0%	0	0 / 0	53%	21.07	42 / 80
heart	38%	777.83	328 / 861	0%	0	0 / 0
liver	1%	16.80	3 / 226	30%	11.53	123 / 406
lymph node	0%	0	0 / 0	31%	9.22	9 / 29
muscle	4%	59.24	29 / 803	0%	0	0 / 0
spleen	2%	23.94	5 / 241	0%	0	0 / 0
peripheral blood	0%	1.16	1 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1