Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 15 studies | 29% ± 10% | |
| glutamatergic neuron | 11 studies | 39% ± 22% | |
| oligodendrocyte precursor cell | 9 studies | 28% ± 13% | |
| astrocyte | 8 studies | 29% ± 14% | |
| GABAergic neuron | 8 studies | 43% ± 20% | |
| macrophage | 7 studies | 21% ± 6% | |
| retinal rod cell | 7 studies | 21% ± 4% | |
| neuron | 6 studies | 33% ± 10% | |
| interneuron | 6 studies | 46% ± 24% | |
| epithelial cell | 6 studies | 28% ± 10% | |
| retinal cone cell | 6 studies | 43% ± 10% | |
| oligodendrocyte | 6 studies | 29% ± 10% | |
| microglial cell | 5 studies | 22% ± 5% | |
| ciliated cell | 5 studies | 28% ± 10% | |
| retinal ganglion cell | 4 studies | 41% ± 20% | |
| basal cell | 4 studies | 26% ± 6% | |
| amacrine cell | 4 studies | 25% ± 9% | |
| retinal pigment epithelial cell | 4 studies | 29% ± 13% | |
| fibroblast | 4 studies | 22% ± 6% | |
| retinal bipolar neuron | 3 studies | 25% ± 5% | |
| GABAergic interneuron | 3 studies | 32% ± 6% | |
| retina horizontal cell | 3 studies | 21% ± 2% | |
| Mueller cell | 3 studies | 18% ± 1% | |
| OFF-bipolar cell | 3 studies | 19% ± 2% | |
| ON-bipolar cell | 3 studies | 23% ± 3% | |
| rod bipolar cell | 3 studies | 30% ± 3% | |
| dendritic cell | 3 studies | 20% ± 5% | |
| goblet cell | 3 studies | 36% ± 17% | |
| granule cell | 3 studies | 20% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 1928.63 | 1445 / 1445 | 100% | 35.43 | 183 / 183 |
| prostate | 100% | 2025.49 | 245 / 245 | 100% | 47.83 | 502 / 502 |
| ovary | 100% | 1881.21 | 180 / 180 | 100% | 22.34 | 429 / 430 |
| breast | 100% | 2487.81 | 459 / 459 | 100% | 45.74 | 1115 / 1118 |
| brain | 100% | 3616.35 | 2642 / 2642 | 100% | 42.52 | 703 / 705 |
| thymus | 100% | 2228.03 | 653 / 653 | 100% | 38.86 | 602 / 605 |
| lung | 100% | 1627.78 | 576 / 578 | 100% | 29.99 | 1152 / 1155 |
| adrenal gland | 100% | 1647.03 | 258 / 258 | 99% | 51.54 | 228 / 230 |
| kidney | 100% | 1451.69 | 89 / 89 | 99% | 36.62 | 891 / 901 |
| uterus | 100% | 2120.82 | 170 / 170 | 99% | 22.92 | 453 / 459 |
| bladder | 100% | 2232.76 | 21 / 21 | 98% | 27.06 | 496 / 504 |
| pancreas | 99% | 1249.57 | 325 / 328 | 98% | 28.86 | 175 / 178 |
| stomach | 100% | 1859.91 | 359 / 359 | 97% | 25.18 | 278 / 286 |
| intestine | 100% | 1991.55 | 965 / 966 | 97% | 24.82 | 509 / 527 |
| skin | 100% | 2115.11 | 1806 / 1809 | 90% | 21.62 | 426 / 472 |
| liver | 91% | 686.75 | 206 / 226 | 83% | 10.87 | 336 / 406 |
| blood vessel | 100% | 2540.69 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 22.13 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 9.87 | 1 / 1 |
| adipose | 100% | 2392.44 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 100% | 1209.81 | 801 / 803 | 0% | 0 | 0 / 0 |
| spleen | 98% | 848.96 | 237 / 241 | 0% | 0 | 0 / 0 |
| heart | 96% | 1306.34 | 828 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 79% | 9.35 | 23 / 29 |
| eye | 0% | 0 | 0 / 0 | 64% | 9.80 | 51 / 80 |
| peripheral blood | 57% | 573.07 | 528 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006892 | Biological process | post-Golgi vesicle-mediated transport |
| GO_0015031 | Biological process | protein transport |
| GO_0006887 | Biological process | exocytosis |
| GO_0006897 | Biological process | endocytosis |
| GO_0051649 | Biological process | establishment of localization in cell |
| GO_0032588 | Cellular component | trans-Golgi network membrane |
| GO_0005802 | Cellular component | trans-Golgi network |
| GO_0030672 | Cellular component | synaptic vesicle membrane |
| GO_0055038 | Cellular component | recycling endosome membrane |
| GO_0030136 | Cellular component | clathrin-coated vesicle |
| GO_0042589 | Cellular component | zymogen granule membrane |
| GO_0035579 | Cellular component | specific granule membrane |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0016020 | Cellular component | membrane |
| GO_0019904 | Molecular function | protein domain specific binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | SCAMP1 |
| Protein name | Secretory carrier membrane protein 1 Secretory carrier-associated membrane protein 1 (Secretory carrier membrane protein 1) Secretory carrier-associated membrane protein (Secretory carrier membrane protein) |
| Synonyms | SCAMP |
| Description | FUNCTION: Functions in post-Golgi recycling pathways. Acts as a recycling carrier to the cell surface. |
| Accessions | A0A087WU14 ENST00000621999.5 [O15126-1] ENST00000320280.8 A0A087WZA6 ENST00000511551.2 ENST00000510030.2 O15126 ENST00000614488.4 [O15126-2] ENST00000618166.4 A0A087WTX8 A0A087WXB0 |