Name | Number of supported studies | Average coverage | |
---|---|---|---|
neuron | 5 studies | 23% ± 11% | |
epithelial cell | 5 studies | 28% ± 10% | |
GABAergic neuron | 5 studies | 32% ± 14% | |
endothelial cell | 4 studies | 22% ± 4% | |
glutamatergic neuron | 4 studies | 41% ± 17% | |
goblet cell | 4 studies | 19% ± 2% | |
dendritic cell | 3 studies | 24% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 31% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3495.15 | 1445 / 1445 | 100% | 34.99 | 183 / 183 |
intestine | 100% | 3622.95 | 966 / 966 | 100% | 31.81 | 527 / 527 |
ovary | 100% | 2938.50 | 180 / 180 | 100% | 39.18 | 430 / 430 |
lung | 100% | 2633.52 | 577 / 578 | 100% | 35.75 | 1155 / 1155 |
prostate | 100% | 3692.28 | 245 / 245 | 100% | 48.87 | 501 / 502 |
uterus | 100% | 3795.72 | 170 / 170 | 100% | 50.01 | 458 / 459 |
stomach | 100% | 2236.29 | 359 / 359 | 100% | 31.91 | 285 / 286 |
bladder | 100% | 2861.19 | 21 / 21 | 100% | 40.23 | 502 / 504 |
skin | 100% | 3160.49 | 1809 / 1809 | 99% | 27.44 | 469 / 472 |
breast | 100% | 2689.81 | 459 / 459 | 99% | 47.15 | 1109 / 1118 |
thymus | 100% | 2374.87 | 652 / 653 | 98% | 15.75 | 595 / 605 |
brain | 98% | 4815.78 | 2592 / 2642 | 100% | 23.63 | 705 / 705 |
adrenal gland | 100% | 2796.19 | 258 / 258 | 95% | 37.33 | 218 / 230 |
pancreas | 96% | 1243.54 | 314 / 328 | 99% | 35.44 | 176 / 178 |
kidney | 100% | 3037.52 | 89 / 89 | 94% | 17.15 | 850 / 901 |
liver | 59% | 491.55 | 134 / 226 | 79% | 13.85 | 320 / 406 |
blood vessel | 100% | 4613.92 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1878.17 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 35.56 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 20.99 | 1 / 1 |
adipose | 100% | 2849.39 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 99% | 1974.00 | 856 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 14.53 | 79 / 80 |
lymph node | 0% | 0 | 0 / 0 | 86% | 11.48 | 25 / 29 |
muscle | 76% | 721.22 | 614 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 54% | 550.12 | 503 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000209 | Biological process | protein polyubiquitination |
GO_0014069 | Cellular component | postsynaptic density |
GO_0005829 | Cellular component | cytosol |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005769 | Cellular component | early endosome |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0005874 | Cellular component | microtubule |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
Gene name | RUSC1 |
Protein name | RUN and SH3 domain containing 1 AP-4 complex accessory subunit RUSC1 (New molecule containing SH3 at the carboxy-terminus) (Nesca) (RUN and SH3 domain-containing protein 1) |
Synonyms | DKFZp761A1822 NESCA hCG_2039583 |
Description | FUNCTION: Associates with the adapter-like complex 4 (AP-4) and may therefore play a role in vesicular trafficking of proteins at the trans-Golgi network . Signaling adapter which plays a role in neuronal differentiation . Involved in regulation of NGF-dependent neurite outgrowth . May play a role in neuronal vesicular trafficking, specifically involving pre-synaptic membrane proteins (By similarity). Seems to be involved in signaling pathways that are regulated by the prolonged activation of MAPK . Can regulate the polyubiquitination of IKBKG and thus may be involved in regulation of the NF-kappa-B pathway . . |
Accessions | ENST00000471876.5 ENST00000368352.10 [Q9BVN2-1] A0A087WYU8 Q9BVN2 A0A087WX95 ENST00000479924.5 ENST00000292254.8 [Q9BVN2-2] Q68CX2 ENST00000497930.6 A0A087WZ68 ENST00000490373.5 ENST00000368347.8 [Q9BVN2-3] ENST00000696599.1 A0A087WYB2 A0A8Q3SIT1 A0A087WW20 A0A087WVK5 ENST00000485924.2 ENST00000489860.5 ENST00000468764.5 ENST00000368354.7 [Q9BVN2-4] ENST00000368349.8 [Q9BVN2-2] |