RTL8C report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	27 studies	36% ± 20%	Explore
smooth muscle cell	22 studies	30% ± 14%	Explore
pericyte	19 studies	31% ± 13%	Explore
endothelial cell	18 studies	29% ± 12%	Explore
myofibroblast cell	12 studies	38% ± 17%	Explore
connective tissue cell	12 studies	43% ± 20%	Explore
endothelial cell of lymphatic vessel	8 studies	30% ± 12%	Explore
neuron	7 studies	46% ± 20%	Explore
classical monocyte	6 studies	18% ± 2%	Explore
oligodendrocyte	6 studies	22% ± 6%	Explore
glutamatergic neuron	6 studies	33% ± 16%	Explore
capillary endothelial cell	5 studies	27% ± 11%	Explore
epithelial cell	5 studies	34% ± 12%	Explore
type I pneumocyte	5 studies	27% ± 9%	Explore
astrocyte	5 studies	24% ± 12%	Explore
macrophage	5 studies	23% ± 4%	Explore
non-classical monocyte	5 studies	21% ± 5%	Explore
kidney loop of Henle epithelial cell	4 studies	27% ± 8%	Explore
kidney distal convoluted tubule epithelial cell	4 studies	33% ± 11%	Explore
endothelial cell of artery	4 studies	25% ± 3%	Explore
vein endothelial cell	4 studies	29% ± 16%	Explore
retinal ganglion cell	4 studies	78% ± 24%	Explore
abnormal cell	4 studies	40% ± 25%	Explore
basal cell	4 studies	28% ± 8%	Explore
mesothelial cell	4 studies	49% ± 20%	Explore
retina horizontal cell	4 studies	34% ± 13%	Explore
endothelial cell of vascular tree	4 studies	23% ± 5%	Explore
GABAergic neuron	4 studies	34% ± 5%	Explore
oligodendrocyte precursor cell	4 studies	35% ± 20%	Explore
renal alpha-intercalated cell	3 studies	26% ± 7%	Explore
neural crest cell	3 studies	25% ± 12%	Explore
myeloid cell	3 studies	21% ± 2%	Explore
amacrine cell	3 studies	32% ± 10%	Explore
ciliated cell	3 studies	22% ± 5%	Explore
conventional dendritic cell	3 studies	29% ± 12%	Explore
dendritic cell	3 studies	40% ± 21%	Explore
interneuron	3 studies	25% ± 8%	Explore
enteroendocrine cell	3 studies	31% ± 15%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	7 studies	29% ± 9%	Explore
lung	6 studies	29% ± 13%	Explore
intestine	4 studies	29% ± 13%	Explore
eye	4 studies	22% ± 6%	Explore
uterus	4 studies	22% ± 9%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	9566.65	258 / 258	100%	561.96	230 / 230
brain	100%	13689.02	2642 / 2642	100%	644.59	705 / 705
ovary	100%	9195.44	180 / 180	100%	324.28	430 / 430
uterus	100%	9572.52	170 / 170	100%	277.59	458 / 459
thymus	100%	6334.68	651 / 653	100%	234.06	605 / 605
skin	100%	6597.85	1803 / 1809	100%	389.31	472 / 472
prostate	100%	9610.20	245 / 245	100%	252.55	500 / 502
kidney	100%	7674.62	89 / 89	99%	275.99	893 / 901
breast	100%	7198.00	459 / 459	98%	202.50	1091 / 1118
lung	100%	6800.87	576 / 578	97%	214.61	1123 / 1155
esophagus	100%	10353.70	1445 / 1445	94%	215.11	172 / 183
bladder	100%	8204.71	21 / 21	93%	222.36	467 / 504
stomach	98%	5044.33	353 / 359	84%	139.46	239 / 286
intestine	99%	7315.47	961 / 966	78%	117.93	409 / 527
pancreas	51%	1181.19	167 / 328	99%	248.74	176 / 178
liver	64%	1634.88	144 / 226	83%	129.03	338 / 406
adipose	100%	8335.70	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	404.77	80 / 80
tonsil	0%	0	0 / 0	100%	176.09	45 / 45
ureter	0%	0	0 / 0	100%	217.21	1 / 1
blood vessel	100%	12472.66	1334 / 1335	0%	0	0 / 0
heart	100%	12526.33	859 / 861	0%	0	0 / 0
spleen	100%	4125.71	240 / 241	0%	0	0 / 0
muscle	99%	6669.44	796 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	83%	88.70	24 / 29
peripheral blood	38%	761.06	349 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0