RTBDN report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
retinal rod cell	8 studies	56% ± 26%	Explore
retinal cone cell	7 studies	64% ± 31%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
eye	5 studies	39% ± 21%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	83%	154.37	2185 / 2642	29%	0.70	203 / 705
adrenal gland	24%	26.07	62 / 258	70%	17.10	162 / 230
intestine	48%	17.76	466 / 966	9%	0.70	47 / 527
stomach	32%	10.22	116 / 359	14%	0.61	40 / 286
pancreas	13%	3.64	44 / 328	22%	0.91	39 / 178
esophagus	6%	1.57	85 / 1445	14%	0.46	26 / 183
uterus	0%	0	0 / 170	19%	0.96	87 / 459
breast	0%	0	0 / 459	16%	1.63	177 / 1118
tonsil	0%	0	0 / 0	13%	0.36	6 / 45
lung	0%	0	0 / 578	12%	0.38	140 / 1155
thymus	0%	0.14	3 / 653	12%	1.93	70 / 605
ovary	0%	0	0 / 180	10%	0.45	45 / 430
skin	1%	0.40	13 / 1809	10%	0.41	46 / 472
liver	0%	0	0 / 226	10%	0.25	40 / 406
bladder	0%	0	0 / 21	7%	0.26	36 / 504
eye	0%	0	0 / 0	6%	1.95	5 / 80
kidney	0%	0	0 / 89	1%	0.04	9 / 901
prostate	0%	0.20	1 / 245	0%	0.00	1 / 502
adipose	0%	0.05	2 / 1204	0%	0	0 / 0
blood vessel	0%	0.06	2 / 1335	0%	0	0 / 0
heart	0%	0.02	1 / 861	0%	0	0 / 0
peripheral blood	0%	0.03	1 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1