Name | Number of supported studies | Average coverage | |
---|---|---|---|
retinal rod cell | 8 studies | 38% ± 21% | |
retinal cone cell | 7 studies | 68% ± 20% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
eye | 5 studies | 29% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 99% | 198.59 | 570 / 578 | 3% | 0.06 | 29 / 1155 |
thymus | 93% | 28.04 | 606 / 653 | 2% | 0.03 | 12 / 605 |
brain | 93% | 78.32 | 2459 / 2642 | 1% | 0.04 | 9 / 705 |
kidney | 34% | 5.79 | 30 / 89 | 0% | 0.01 | 4 / 901 |
prostate | 31% | 4.20 | 76 / 245 | 0% | 0.01 | 2 / 502 |
spleen | 20% | 2.54 | 48 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 19% | 2.33 | 256 / 1335 | 0% | 0 | 0 / 0 |
uterus | 16% | 1.87 | 27 / 170 | 0% | 0.00 | 1 / 459 |
ovary | 10% | 1.37 | 18 / 180 | 0% | 0.01 | 2 / 430 |
eye | 0% | 0 | 0 / 0 | 9% | 2.61 | 7 / 80 |
intestine | 7% | 0.91 | 72 / 966 | 0% | 0.00 | 1 / 527 |
esophagus | 7% | 0.93 | 108 / 1445 | 0% | 0 | 0 / 183 |
peripheral blood | 7% | 1.68 | 68 / 929 | 0% | 0 | 0 / 0 |
adrenal gland | 4% | 0.49 | 11 / 258 | 2% | 0.10 | 4 / 230 |
breast | 5% | 0.65 | 25 / 459 | 0% | 0.01 | 3 / 1118 |
bladder | 5% | 0.57 | 1 / 21 | 1% | 0.02 | 4 / 504 |
stomach | 5% | 0.51 | 17 / 359 | 1% | 0.02 | 2 / 286 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.17 | 1 / 29 |
heart | 3% | 0.37 | 29 / 861 | 0% | 0 | 0 / 0 |
skin | 3% | 0.62 | 52 / 1809 | 0% | 0.01 | 2 / 472 |
adipose | 2% | 0.27 | 30 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 1% | 0.13 | 4 / 328 | 0% | 0 | 0 / 178 |
muscle | 1% | 0.08 | 6 / 803 | 0% | 0 | 0 / 0 |
liver | 0% | 0.04 | 1 / 226 | 0% | 0.00 | 1 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007601 | Biological process | visual perception |
GO_0051260 | Biological process | protein homooligomerization |
GO_0007155 | Biological process | cell adhesion |
GO_0001654 | Biological process | eye development |
GO_0010842 | Biological process | retina layer formation |
GO_0005615 | Cellular component | extracellular space |
GO_0098984 | Cellular component | neuron to neuron synapse |
GO_0032991 | Cellular component | protein-containing complex |
GO_0001917 | Cellular component | photoreceptor inner segment |
GO_0009897 | Cellular component | external side of plasma membrane |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0001786 | Molecular function | phosphatidylserine binding |
GO_0043325 | Molecular function | phosphatidylinositol-3,4-bisphosphate binding |
GO_0005543 | Molecular function | phospholipid binding |
Gene name | RS1 |
Protein name | Retinoschisin Retinoschisin (X-linked juvenile retinoschisis protein) |
Synonyms | XLRS1 |
Description | FUNCTION: Binds negatively charged membrane lipids, such as phosphatidylserine and phosphoinositides (By similarity). May play a role in cell-cell adhesion processes in the retina, via homomeric interaction between octamers present on the surface of two neighboring cells . Required for normal structure and function of the retina . . |
Accessions | A0MT07 ENST00000379984.4 O15537 |