Name | Number of supported studies | Average coverage | |
---|---|---|---|
deuterosomal cell | 3 studies | 28% ± 1% | |
epithelial cell | 3 studies | 23% ± 7% | |
ciliated cell | 3 studies | 18% ± 1% |
Insufficient scRNA-seq data for expression of RPL39L at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 293.36 | 459 / 459 | 92% | 55.54 | 1031 / 1118 |
skin | 100% | 450.33 | 1808 / 1809 | 90% | 55.62 | 423 / 472 |
ovary | 89% | 129.87 | 161 / 180 | 99% | 97.31 | 425 / 430 |
uterus | 100% | 281.64 | 170 / 170 | 87% | 109.52 | 400 / 459 |
lung | 97% | 164.60 | 558 / 578 | 85% | 75.80 | 983 / 1155 |
esophagus | 100% | 227.33 | 1442 / 1445 | 78% | 40.35 | 143 / 183 |
prostate | 100% | 303.42 | 244 / 245 | 53% | 12.65 | 265 / 502 |
thymus | 93% | 125.41 | 609 / 653 | 49% | 14.03 | 297 / 605 |
stomach | 90% | 164.08 | 324 / 359 | 50% | 16.89 | 143 / 286 |
bladder | 100% | 249.95 | 21 / 21 | 38% | 23.14 | 192 / 504 |
intestine | 97% | 263.92 | 936 / 966 | 40% | 13.78 | 212 / 527 |
kidney | 96% | 150.58 | 85 / 89 | 35% | 7.93 | 319 / 901 |
brain | 98% | 212.90 | 2577 / 2642 | 26% | 9.92 | 180 / 705 |
lymph node | 0% | 0 | 0 / 0 | 100% | 139.54 | 29 / 29 |
spleen | 100% | 201.08 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 510.64 | 1333 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 223.41 | 1199 / 1204 | 0% | 0 | 0 / 0 |
liver | 50% | 58.00 | 113 / 226 | 47% | 18.37 | 189 / 406 |
adrenal gland | 73% | 74.99 | 188 / 258 | 23% | 6.10 | 53 / 230 |
heart | 95% | 187.74 | 818 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 103.86 | 41 / 45 |
pancreas | 16% | 13.45 | 54 / 328 | 65% | 19.20 | 116 / 178 |
eye | 0% | 0 | 0 / 0 | 55% | 11.31 | 44 / 80 |
peripheral blood | 37% | 187.26 | 341 / 929 | 0% | 0 | 0 / 0 |
muscle | 4% | 3.28 | 30 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006412 | Biological process | translation |
GO_0007283 | Biological process | spermatogenesis |
GO_0022625 | Cellular component | cytosolic large ribosomal subunit |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0005515 | Molecular function | protein binding |
Gene name | RPL39L |
Protein name | Ribosomal protein eL39-like 2 (60S ribosomal protein L39-2) (60S ribosomal protein L39-like) (Large ribosomal subunit protein eL39-like) |
Synonyms | RPL39L1 |
Description | FUNCTION: Male germ cell-specific component of the ribosome, which is required for the formation of sperm and male fertility. Replaces the RPL39 paralog in the ribosome of male germ cells. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The male germ cell-specific ribosome displays a ribosomal polypeptide exit tunnel of distinct size and charge states compared with the classical ribosome. It is responsible for regulating the biosynthesis and folding of a subset of male germ-cell-specific proteins that are essential for the formation of sperm. . |
Accessions | Q96EH5 ENST00000296277.9 ENST00000433055.1 ENST00000455270.5 |