RP1 | OmnibusX

Name	Number of supported studies	Average coverage
eye	7 studies	47% ± 19%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	99%	582.30	570 / 578	14%	0.52	167 / 1155
kidney	97%	116.31	86 / 89	6%	0.09	50 / 901
ovary	76%	38.93	137 / 180	22%	0.46	96 / 430
spleen	96%	56.46	231 / 241	0%	0	0 / 0
breast	76%	64.44	347 / 459	17%	0.56	187 / 1118
stomach	75%	98.18	269 / 359	5%	0.11	15 / 286
skin	74%	36.49	1345 / 1809	3%	0.07	12 / 472
adipose	48%	22.50	581 / 1204	0%	0	0 / 0
brain	38%	7.50	1006 / 2642	0%	0	0 / 705
prostate	33%	7.09	81 / 245	1%	0.02	5 / 502
uterus	28%	73.51	47 / 170	3%	0.07	12 / 459
thymus	25%	8.30	165 / 653	4%	0.05	22 / 605
bladder	19%	3.86	4 / 21	2%	0.03	10 / 504
liver	20%	5.31	45 / 226	1%	0.02	4 / 406
blood vessel	12%	2.94	161 / 1335	0%	0	0 / 0
esophagus	7%	1.37	99 / 1445	3%	0.06	5 / 183
intestine	6%	1.12	54 / 966	3%	0.04	15 / 527
adrenal gland	7%	0.95	19 / 258	0%	0	0 / 230
pancreas	1%	0.24	3 / 328	4%	0.06	7 / 178
heart	4%	0.50	33 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	4%	0.53	3 / 80
peripheral blood	3%	0.85	29 / 929	0%	0	0 / 0
muscle	1%	0.27	12 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0007601	Biological process	visual perception
GO_0035845	Biological process	photoreceptor cell outer segment organization
GO_0046548	Biological process	retinal rod cell development
GO_0071482	Biological process	cellular response to light stimulus
GO_0045494	Biological process	photoreceptor cell maintenance
GO_0060041	Biological process	retina development in camera-type eye
GO_0042461	Biological process	photoreceptor cell development
GO_0046549	Biological process	retinal cone cell development
GO_0035556	Biological process	intracellular signal transduction
GO_0007603	Biological process	phototransduction, visible light
GO_0035082	Biological process	axoneme assembly
GO_1902857	Biological process	positive regulation of non-motile cilium assembly
GO_0032391	Cellular component	photoreceptor connecting cilium
GO_0005874	Cellular component	microtubule
GO_0001750	Cellular component	photoreceptor outer segment
GO_0001917	Cellular component	photoreceptor inner segment
GO_0005930	Cellular component	axoneme
GO_0097542	Cellular component	ciliary tip
GO_0005875	Cellular component	microtubule associated complex
GO_0008017	Molecular function	microtubule binding
GO_0005515	Molecular function	protein binding

Gene name	RP1
Protein name	Retinitis pigmentosa 1 Oxygen-regulated protein 1 (Retinitis pigmentosa 1 protein) (Retinitis pigmentosa RP1 protein) RP1 axonemal microtubule associated
Synonyms	ORP1
Description	FUNCTION: Microtubule-associated protein regulating the stability and length of the microtubule-based axoneme of photoreceptors. Required for the differentiation of photoreceptor cells, it plays a role in the organization of the outer segment of rod and cone photoreceptors ensuring the correct orientation and higher-order stacking of outer segment disks along the photoreceptor axoneme (By similarity). .
Accessions	A0A1B0GUH0 A0FDN2 ENST00000636932.1 P56715 Q6DKV0 ENST00000637698.1 A0A1B0GTV9 ENST00000220676.2

RP1 report