Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 37 studies | 30% ± 11% | |
endothelial cell of lymphatic vessel | 19 studies | 28% ± 8% | |
capillary endothelial cell | 15 studies | 38% ± 12% | |
vein endothelial cell | 11 studies | 23% ± 6% | |
endothelial cell of vascular tree | 7 studies | 29% ± 12% | |
endothelial cell of artery | 5 studies | 25% ± 11% | |
glomerular endothelial cell | 3 studies | 61% ± 8% | |
pericyte | 3 studies | 22% ± 8% | |
endothelial cell of sinusoid | 3 studies | 37% ± 19% |
Insufficient scRNA-seq data for expression of ROBO4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 4124.57 | 653 / 653 | 95% | 15.93 | 573 / 605 |
breast | 100% | 7237.76 | 459 / 459 | 94% | 9.06 | 1053 / 1118 |
adrenal gland | 95% | 1514.12 | 245 / 258 | 89% | 14.13 | 205 / 230 |
lung | 100% | 8481.33 | 578 / 578 | 81% | 6.82 | 931 / 1155 |
kidney | 100% | 3150.36 | 89 / 89 | 78% | 26.14 | 707 / 901 |
bladder | 95% | 2129.86 | 20 / 21 | 75% | 5.27 | 379 / 504 |
prostate | 93% | 1798.07 | 227 / 245 | 77% | 4.92 | 386 / 502 |
esophagus | 84% | 1725.77 | 1210 / 1445 | 83% | 7.52 | 151 / 183 |
intestine | 88% | 1465.80 | 854 / 966 | 77% | 5.55 | 408 / 527 |
stomach | 81% | 1044.55 | 289 / 359 | 83% | 7.02 | 238 / 286 |
uterus | 99% | 3208.75 | 169 / 170 | 54% | 3.86 | 247 / 459 |
brain | 51% | 588.45 | 1351 / 2642 | 100% | 15.76 | 703 / 705 |
skin | 66% | 1005.82 | 1193 / 1809 | 71% | 6.03 | 334 / 472 |
pancreas | 23% | 214.18 | 77 / 328 | 92% | 7.73 | 163 / 178 |
liver | 29% | 320.70 | 66 / 226 | 80% | 5.72 | 325 / 406 |
ovary | 58% | 803.04 | 105 / 180 | 44% | 2.42 | 191 / 430 |
adipose | 100% | 8620.50 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 10971.41 | 241 / 241 | 0% | 0 | 0 / 0 |
heart | 98% | 2454.46 | 843 / 861 | 0% | 0 | 0 / 0 |
muscle | 85% | 1129.80 | 681 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 76% | 4.33 | 34 / 45 |
lymph node | 0% | 0 | 0 / 0 | 69% | 3.66 | 20 / 29 |
blood vessel | 58% | 1040.25 | 772 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 35% | 1.91 | 28 / 80 |
peripheral blood | 0% | 1.91 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0061028 | Biological process | establishment of endothelial barrier |
GO_0001525 | Biological process | angiogenesis |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0030334 | Biological process | regulation of cell migration |
GO_0070593 | Biological process | dendrite self-avoidance |
GO_0007411 | Biological process | axon guidance |
GO_0030424 | Cellular component | axon |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0098632 | Molecular function | cell-cell adhesion mediator activity |
GO_0038023 | Molecular function | signaling receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | ROBO4 |
Protein name | Roundabout guidance receptor 4 (cDNA FLJ54518, highly similar to Roundabout homolog 4) Roundabout homolog 4 (Magic roundabout) |
Synonyms | UNQ421/PRO3674 |
Description | FUNCTION: Receptor for Slit proteins, at least for SLIT2, and seems to be involved in angiogenesis and vascular patterning. May mediate the inhibition of primary endothelial cell migration by Slit proteins (By similarity). Involved in the maintenance of endothelial barrier organization and function . . |
Accessions | ENST00000306534.8 [Q8WZ75-1] B4DYV8 ENST00000533054.5 Q8WZ75 |