Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasmacytoid dendritic cell | 6 studies | 26% ± 9% | |
oligodendrocyte | 4 studies | 20% ± 3% | |
epithelial cell | 3 studies | 25% ± 6% | |
type II pneumocyte | 3 studies | 24% ± 4% | |
glutamatergic neuron | 3 studies | 22% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 20% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 1321.33 | 21 / 21 | 100% | 17.86 | 504 / 504 |
breast | 100% | 1307.47 | 459 / 459 | 100% | 20.45 | 1118 / 1118 |
esophagus | 100% | 1220.99 | 1445 / 1445 | 100% | 25.37 | 183 / 183 |
lung | 100% | 1784.69 | 578 / 578 | 100% | 21.54 | 1155 / 1155 |
skin | 100% | 1243.16 | 1809 / 1809 | 100% | 22.09 | 472 / 472 |
stomach | 100% | 1271.41 | 359 / 359 | 100% | 18.98 | 286 / 286 |
intestine | 100% | 1269.65 | 966 / 966 | 100% | 17.63 | 526 / 527 |
prostate | 100% | 1185.48 | 245 / 245 | 100% | 15.15 | 501 / 502 |
uterus | 100% | 1228.36 | 170 / 170 | 100% | 18.33 | 458 / 459 |
kidney | 100% | 1387.18 | 89 / 89 | 100% | 17.87 | 899 / 901 |
ovary | 100% | 1084.59 | 180 / 180 | 100% | 16.36 | 429 / 430 |
pancreas | 100% | 635.96 | 327 / 328 | 100% | 20.36 | 178 / 178 |
thymus | 100% | 1201.31 | 653 / 653 | 100% | 14.51 | 603 / 605 |
liver | 100% | 917.09 | 226 / 226 | 100% | 12.86 | 404 / 406 |
brain | 99% | 804.87 | 2603 / 2642 | 100% | 16.86 | 705 / 705 |
adrenal gland | 100% | 1115.72 | 258 / 258 | 98% | 24.71 | 226 / 230 |
adipose | 100% | 1365.24 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1479.22 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 32.12 | 29 / 29 |
peripheral blood | 100% | 1889.44 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 1834.99 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.52 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.52 | 1 / 1 |
muscle | 99% | 847.12 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 680.86 | 835 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 10.36 | 77 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006914 | Biological process | autophagy |
GO_0010506 | Biological process | regulation of autophagy |
GO_0031902 | Cellular component | late endosome membrane |
GO_0035658 | Cellular component | Mon1-Ccz1 complex |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | RMC1 |
Protein name | Regulator of MON1-CCZ1 complex (Colon cancer-associated protein Mic1) (Mic-1) (WD repeat-containing protein 98) Regulator of MON1-CCZ1 |
Synonyms | C18orf8 MIC1 WDR98 |
Description | FUNCTION: Componement of the CCZ1-MON1 RAB7A guanine exchange factor (GEF). Acts as a positive regulator of CCZ1-MON1A/B function necessary for endosomal/autophagic flux and efficient RAB7A localization . . |
Accessions | Q96DM3 ENST00000590870.5 ENST00000587690.5 K7EL80 K7EQJ3 K7ENL9 ENST00000269221.8 ENST00000589860.5 ENST00000615148.5 ENST00000590868.5 K7EIS6 K7EQ65 ENST00000589215.5 A0A087WZD4 |