Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 20% ± 6% | |
ciliated cell | 3 studies | 22% ± 6% |
Insufficient scRNA-seq data for expression of RITA1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 824.81 | 180 / 180 | 100% | 46.80 | 430 / 430 |
skin | 100% | 906.02 | 1809 / 1809 | 100% | 39.82 | 472 / 472 |
thymus | 100% | 913.74 | 653 / 653 | 100% | 33.89 | 604 / 605 |
prostate | 100% | 853.58 | 245 / 245 | 100% | 38.51 | 501 / 502 |
liver | 100% | 1224.75 | 226 / 226 | 100% | 31.15 | 405 / 406 |
brain | 100% | 1100.95 | 2633 / 2642 | 100% | 27.92 | 705 / 705 |
breast | 100% | 659.50 | 459 / 459 | 100% | 35.18 | 1114 / 1118 |
uterus | 100% | 695.98 | 170 / 170 | 100% | 30.58 | 457 / 459 |
esophagus | 100% | 790.55 | 1445 / 1445 | 99% | 26.77 | 182 / 183 |
intestine | 100% | 778.89 | 966 / 966 | 99% | 34.20 | 523 / 527 |
adrenal gland | 100% | 1931.91 | 258 / 258 | 99% | 31.81 | 228 / 230 |
stomach | 99% | 558.36 | 357 / 359 | 100% | 32.89 | 285 / 286 |
kidney | 100% | 1116.53 | 89 / 89 | 99% | 25.39 | 892 / 901 |
pancreas | 99% | 471.92 | 326 / 328 | 99% | 21.81 | 177 / 178 |
bladder | 100% | 677.38 | 21 / 21 | 99% | 30.21 | 498 / 504 |
lung | 97% | 595.73 | 560 / 578 | 100% | 31.33 | 1153 / 1155 |
eye | 0% | 0 | 0 / 0 | 100% | 32.63 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 38.19 | 29 / 29 |
muscle | 100% | 1230.49 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 746.54 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 27.74 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 34.30 | 1 / 1 |
adipose | 100% | 553.30 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 625.30 | 1328 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 672.66 | 838 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 634.19 | 856 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0022008 | Biological process | neurogenesis |
GO_0051168 | Biological process | nuclear export |
GO_0045746 | Biological process | negative regulation of Notch signaling pathway |
GO_0007219 | Biological process | Notch signaling pathway |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0005813 | Cellular component | centrosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0015631 | Molecular function | tubulin binding |
Gene name | RITA1 |
Protein name | RBPJ-interacting and tubulin-associated protein 1 (RBPJ-interacting and tubulin-associated protein) RBPJ interacting and tubulin associated 1 |
Synonyms | RITA PSEC0043 C12orf52 |
Description | FUNCTION: Tubulin-binding protein that acts as a negative regulator of Notch signaling pathway. Shuttles between the cytoplasm and the nucleus and mediates the nuclear export of RBPJ/RBPSUH, thereby preventing the interaction between RBPJ/RBPSUH and NICD product of Notch proteins (Notch intracellular domain), leading to down-regulate Notch-mediated transcription. May play a role in neurogenesis. . |
Accessions | ENST00000548278.2 [Q96K30-1] ENST00000549621.5 [Q96K30-1] Q96K30 ENST00000552495.1 [Q96K30-3] A0A087X1G3 ENST00000615042.1 |