RBP3 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
retinal rod cell	8 studies	52% ± 22%	Explore
retinal cone cell	7 studies	64% ± 27%	Explore
retinal bipolar neuron	3 studies	25% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
eye	6 studies	33% ± 16%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	49.86	2612 / 2642	41%	1.09	289 / 705
kidney	56%	7.12	50 / 89	0%	0.00	1 / 901
skin	47%	8.80	845 / 1809	0%	0	0 / 472
prostate	41%	4.82	101 / 245	0%	0	0 / 502
ovary	36%	3.17	65 / 180	0%	0	0 / 430
bladder	29%	2.62	6 / 21	5%	0.11	23 / 504
breast	29%	2.81	135 / 459	1%	0.01	8 / 1118
adrenal gland	9%	0.69	24 / 258	20%	0.95	46 / 230
adipose	27%	2.50	327 / 1204	0%	0	0 / 0
thymus	26%	2.15	170 / 653	0%	0	0 / 605
uterus	24%	2.20	41 / 170	1%	0.02	6 / 459
esophagus	23%	1.87	334 / 1445	2%	0.04	3 / 183
intestine	21%	4.89	199 / 966	3%	0.08	17 / 527
eye	0%	0	0 / 0	16%	17.53	13 / 80
blood vessel	12%	1.00	158 / 1335	0%	0	0 / 0
lung	11%	0.79	62 / 578	1%	0.03	9 / 1155
stomach	9%	0.64	34 / 359	2%	0.07	5 / 286
spleen	6%	0.44	15 / 241	0%	0	0 / 0
pancreas	1%	0.04	2 / 328	2%	0.07	4 / 178
muscle	2%	0.16	20 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	2%	0.03	1 / 45
liver	2%	0.12	5 / 226	0%	0	0 / 406
peripheral blood	1%	0.09	10 / 929	0%	0	0 / 0
heart	1%	0.06	8 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1