Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 9 studies | 21% ± 5% | |
endothelial cell | 8 studies | 24% ± 5% | |
basal cell | 7 studies | 25% ± 13% | |
ciliated cell | 6 studies | 23% ± 8% | |
macrophage | 6 studies | 19% ± 2% | |
epithelial cell | 5 studies | 46% ± 15% | |
astrocyte | 5 studies | 24% ± 3% | |
goblet cell | 5 studies | 23% ± 6% | |
pericyte | 4 studies | 19% ± 2% | |
abnormal cell | 4 studies | 24% ± 9% | |
GABAergic neuron | 4 studies | 38% ± 13% | |
glutamatergic neuron | 4 studies | 50% ± 16% | |
oligodendrocyte | 4 studies | 18% ± 2% | |
hematopoietic precursor cell | 3 studies | 18% ± 4% | |
endothelial cell of lymphatic vessel | 3 studies | 20% ± 4% | |
oligodendrocyte precursor cell | 3 studies | 28% ± 4% | |
dendritic cell | 3 studies | 24% ± 3% | |
connective tissue cell | 3 studies | 25% ± 4% | |
club cell | 3 studies | 19% ± 2% | |
transit amplifying cell | 3 studies | 30% ± 16% | |
interneuron | 3 studies | 36% ± 14% | |
neuron | 3 studies | 30% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 2720.14 | 21 / 21 | 100% | 67.16 | 504 / 504 |
esophagus | 100% | 2849.01 | 1445 / 1445 | 100% | 63.46 | 183 / 183 |
intestine | 100% | 2941.51 | 966 / 966 | 100% | 74.19 | 527 / 527 |
lung | 100% | 2555.56 | 578 / 578 | 100% | 61.12 | 1155 / 1155 |
ovary | 100% | 2128.32 | 180 / 180 | 100% | 54.90 | 430 / 430 |
pancreas | 100% | 2243.29 | 328 / 328 | 100% | 58.74 | 178 / 178 |
stomach | 100% | 2419.06 | 359 / 359 | 100% | 67.08 | 286 / 286 |
uterus | 100% | 2552.98 | 170 / 170 | 100% | 70.57 | 459 / 459 |
breast | 100% | 2746.66 | 459 / 459 | 100% | 84.79 | 1117 / 1118 |
prostate | 100% | 2527.75 | 245 / 245 | 100% | 60.79 | 501 / 502 |
skin | 100% | 4694.60 | 1809 / 1809 | 100% | 72.59 | 471 / 472 |
liver | 100% | 1865.55 | 226 / 226 | 100% | 45.32 | 405 / 406 |
thymus | 100% | 2485.04 | 653 / 653 | 100% | 52.89 | 603 / 605 |
kidney | 100% | 2191.80 | 89 / 89 | 100% | 55.85 | 898 / 901 |
adrenal gland | 100% | 2928.55 | 258 / 258 | 98% | 45.00 | 225 / 230 |
brain | 97% | 1349.29 | 2567 / 2642 | 100% | 36.00 | 705 / 705 |
lymph node | 0% | 0 | 0 / 0 | 100% | 80.40 | 29 / 29 |
spleen | 100% | 2945.71 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 67.03 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 20.64 | 1 / 1 |
blood vessel | 100% | 2406.02 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 2658.15 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 1943.76 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1910.50 | 845 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 47.68 | 77 / 80 |
peripheral blood | 73% | 1780.91 | 681 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006420 | Biological process | arginyl-tRNA aminoacylation |
GO_0006418 | Biological process | tRNA aminoacylation for protein translation |
GO_0005730 | Cellular component | nucleolus |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0017101 | Cellular component | aminoacyl-tRNA synthetase multienzyme complex |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0045296 | Molecular function | cadherin binding |
GO_0034618 | Molecular function | arginine binding |
GO_0000049 | Molecular function | tRNA binding |
GO_0004814 | Molecular function | arginine-tRNA ligase activity |
GO_0005515 | Molecular function | protein binding |
GO_0005524 | Molecular function | ATP binding |
Gene name | RARS1 |
Protein name | Arginyl-tRNA synthetase 1 Arginine--tRNA ligase, cytoplasmic (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) |
Synonyms | RARS |
Description | FUNCTION: Forms part of a macromolecular complex that catalyzes the attachment of specific amino acids to cognate tRNAs during protein synthesis . Modulates the secretion of AIMP1 and may be involved in generation of the inflammatory cytokine EMAP2 from AIMP1 . . |
Accessions | ENST00000626454.1 ENST00000521329.5 E5RH09 P54136 ENST00000231572.8 [P54136-1] E5RI24 E5RJM9 ENST00000520013.5 ENST00000522834.5 |