Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| basal cell | 6 studies | 25% ± 10% | |
| glutamatergic neuron | 6 studies | 44% ± 20% | |
| GABAergic neuron | 5 studies | 36% ± 15% | |
| epithelial cell | 4 studies | 30% ± 19% | |
| interneuron | 3 studies | 36% ± 16% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 33% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 82% | 5159.32 | 2167 / 2642 | 81% | 15.25 | 570 / 705 |
| intestine | 43% | 4756.29 | 414 / 966 | 95% | 49.46 | 502 / 527 |
| bladder | 48% | 3196.76 | 10 / 21 | 88% | 64.15 | 444 / 504 |
| esophagus | 39% | 10829.50 | 565 / 1445 | 96% | 83.66 | 176 / 183 |
| stomach | 24% | 730.05 | 86 / 359 | 91% | 43.63 | 260 / 286 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 84.68 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 21.73 | 1 / 1 |
| pancreas | 0% | 6.24 | 1 / 328 | 90% | 43.10 | 161 / 178 |
| uterus | 5% | 374.65 | 9 / 170 | 85% | 65.07 | 390 / 459 |
| skin | 72% | 25436.92 | 1304 / 1809 | 15% | 2.83 | 72 / 472 |
| lung | 10% | 221.81 | 55 / 578 | 66% | 31.89 | 768 / 1155 |
| prostate | 48% | 2439.51 | 118 / 245 | 25% | 3.05 | 123 / 502 |
| breast | 4% | 111.77 | 20 / 459 | 49% | 13.26 | 550 / 1118 |
| ovary | 1% | 24.36 | 2 / 180 | 34% | 5.36 | 148 / 430 |
| liver | 5% | 111.92 | 11 / 226 | 21% | 2.66 | 85 / 406 |
| adrenal gland | 2% | 33.79 | 4 / 258 | 18% | 1.96 | 41 / 230 |
| thymus | 1% | 18.45 | 5 / 653 | 14% | 3.14 | 86 / 605 |
| kidney | 1% | 24.43 | 1 / 89 | 5% | 1.11 | 49 / 901 |
| adipose | 4% | 117.42 | 50 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 4% | 102.97 | 31 / 803 | 0% | 0 | 0 / 0 |
| spleen | 3% | 85.36 | 8 / 241 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 3% | 0.18 | 2 / 80 |
| peripheral blood | 1% | 23.69 | 10 / 929 | 0% | 0 | 0 / 0 |
| blood vessel | 1% | 30.98 | 12 / 1335 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0007265 | Biological process | Ras protein signal transduction |
| GO_0007186 | Biological process | G protein-coupled receptor signaling pathway |
| GO_0007399 | Biological process | nervous system development |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0016020 | Cellular component | membrane |
| GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
| Gene name | RAPGEFL1 |
| Protein name | Rap guanine nucleotide exchange factor like 1 Rap guanine nucleotide exchange factor-like 1 (Link guanine nucleotide exchange factor II) (Link GEFII) |
| Synonyms | |
| Description | FUNCTION: Probable guanine nucleotide exchange factor (GEF). |
| Accessions | ENST00000620260.6 F5H582 F5GYJ3 ENST00000544503.5 F5H2D5 ENST00000543876.5 Q9UHV5 F5GY17 ENST00000538884.1 ENST00000541245.1 A0A087WVW6 ENST00000538981.1 F5GXC6 ENST00000264644.10 [Q9UHV5-2] ENST00000456989.6 [Q9UHV5-3] |
