Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 17 studies | 26% ± 12% | |
glutamatergic neuron | 11 studies | 37% ± 21% | |
GABAergic neuron | 10 studies | 44% ± 24% | |
oligodendrocyte precursor cell | 10 studies | 33% ± 11% | |
type I pneumocyte | 8 studies | 56% ± 24% | |
epithelial cell | 7 studies | 33% ± 18% | |
oligodendrocyte | 7 studies | 29% ± 15% | |
neuron | 6 studies | 38% ± 19% | |
interneuron | 6 studies | 55% ± 26% | |
astrocyte | 5 studies | 37% ± 20% | |
type II pneumocyte | 5 studies | 42% ± 9% | |
amacrine cell | 4 studies | 31% ± 8% | |
retinal rod cell | 4 studies | 24% ± 6% | |
club cell | 4 studies | 38% ± 8% | |
fibroblast | 4 studies | 22% ± 4% | |
GABAergic interneuron | 3 studies | 44% ± 3% | |
granule cell | 3 studies | 24% ± 8% | |
ciliated cell | 3 studies | 24% ± 3% | |
Mueller cell | 3 studies | 21% ± 4% | |
glycinergic amacrine cell | 3 studies | 32% ± 6% | |
retinal pigment epithelial cell | 3 studies | 48% ± 12% | |
transit amplifying cell | 3 studies | 28% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 432.60 | 245 / 245 | 89% | 1.85 | 446 / 502 |
adrenal gland | 100% | 724.87 | 258 / 258 | 86% | 2.13 | 197 / 230 |
breast | 100% | 289.00 | 459 / 459 | 81% | 2.25 | 901 / 1118 |
intestine | 100% | 245.52 | 963 / 966 | 70% | 1.56 | 371 / 527 |
lung | 100% | 528.13 | 577 / 578 | 70% | 1.92 | 805 / 1155 |
uterus | 91% | 221.86 | 155 / 170 | 71% | 2.11 | 326 / 459 |
pancreas | 100% | 343.52 | 328 / 328 | 62% | 1.35 | 110 / 178 |
stomach | 100% | 316.30 | 358 / 359 | 57% | 1.25 | 164 / 286 |
bladder | 100% | 197.43 | 21 / 21 | 56% | 1.28 | 283 / 504 |
thymus | 100% | 791.15 | 653 / 653 | 54% | 1.21 | 329 / 605 |
brain | 88% | 238.51 | 2333 / 2642 | 55% | 1.39 | 386 / 705 |
skin | 70% | 150.68 | 1263 / 1809 | 73% | 2.47 | 343 / 472 |
ovary | 94% | 214.44 | 169 / 180 | 48% | 0.80 | 207 / 430 |
kidney | 100% | 371.80 | 89 / 89 | 28% | 0.55 | 255 / 901 |
liver | 86% | 164.77 | 194 / 226 | 35% | 0.85 | 142 / 406 |
esophagus | 77% | 163.65 | 1119 / 1445 | 42% | 1.01 | 76 / 183 |
blood vessel | 99% | 255.55 | 1319 / 1335 | 0% | 0 | 0 / 0 |
adipose | 91% | 176.55 | 1096 / 1204 | 0% | 0 | 0 / 0 |
heart | 83% | 116.45 | 712 / 861 | 0% | 0 | 0 / 0 |
spleen | 78% | 90.61 | 187 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 62% | 1.98 | 28 / 45 |
eye | 0% | 0 | 0 / 0 | 49% | 1.07 | 39 / 80 |
muscle | 6% | 5.39 | 50 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 0.65 | 7 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006611 | Biological process | protein export from nucleus |
GO_0051028 | Biological process | mRNA transport |
GO_0006606 | Biological process | protein import into nucleus |
GO_0005643 | Cellular component | nuclear pore |
GO_0005737 | Cellular component | cytoplasm |
GO_0005525 | Molecular function | GTP binding |
GO_0005049 | Molecular function | nuclear export signal receptor activity |
GO_0031267 | Molecular function | small GTPase binding |
Gene name | RANBP17 |
Protein name | RAN binding protein 17, isoform CRA_b RAN binding protein 17 Ran-binding protein 17 Alternative protein RANBP17 |
Synonyms | hCG_1979306 |
Description | FUNCTION: May function as a nuclear transport receptor. . |
Accessions | H0YBY7 ENST00000523189.6 [Q9H2T7-1] ENST00000522066.5 ENST00000389118.8 [Q9H2T7-2] ENST00000519256.5 [Q9H2T7-2] L8E953 Q9H2T7 H0YBM6 ENST00000518492.1 Q8IVM9 ENST00000522734.1 ENST00000522533.5 [Q9H2T7-2] E5RHX1 ENST00000519944.1 H0YAS2 Q546R4 ENST00000520864.5 ENST00000519949.5 [Q9H2T7-2] |