Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 22% ± 5% | |
epithelial cell | 6 studies | 32% ± 13% | |
type I pneumocyte | 6 studies | 22% ± 4% | |
fibroblast | 5 studies | 21% ± 3% | |
squamous epithelial cell | 4 studies | 40% ± 19% | |
abnormal cell | 4 studies | 21% ± 3% | |
GABAergic neuron | 4 studies | 34% ± 8% | |
goblet cell | 4 studies | 22% ± 3% | |
oligodendrocyte | 4 studies | 19% ± 2% | |
classical monocyte | 3 studies | 18% ± 2% | |
neuron | 3 studies | 29% ± 5% | |
pericyte | 3 studies | 16% ± 1% | |
smooth muscle cell | 3 studies | 17% ± 1% | |
basal cell | 3 studies | 22% ± 8% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 20% ± 5% | |
glutamatergic neuron | 3 studies | 47% ± 3% | |
oligodendrocyte precursor cell | 3 studies | 25% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 9865.10 | 459 / 459 | 100% | 130.15 | 1118 / 1118 |
esophagus | 100% | 15838.80 | 1445 / 1445 | 100% | 85.05 | 183 / 183 |
intestine | 100% | 13265.53 | 966 / 966 | 100% | 82.57 | 527 / 527 |
ovary | 100% | 11506.42 | 180 / 180 | 100% | 129.03 | 430 / 430 |
prostate | 100% | 11731.91 | 245 / 245 | 100% | 144.26 | 502 / 502 |
skin | 100% | 14309.33 | 1809 / 1809 | 100% | 129.38 | 472 / 472 |
thymus | 100% | 9699.74 | 653 / 653 | 100% | 108.01 | 605 / 605 |
uterus | 100% | 13411.14 | 170 / 170 | 100% | 97.66 | 459 / 459 |
brain | 100% | 13160.33 | 2641 / 2642 | 100% | 143.24 | 705 / 705 |
lung | 100% | 10915.55 | 578 / 578 | 100% | 93.95 | 1154 / 1155 |
kidney | 100% | 9201.36 | 89 / 89 | 100% | 89.62 | 899 / 901 |
stomach | 100% | 9772.87 | 359 / 359 | 100% | 77.90 | 285 / 286 |
bladder | 100% | 12796.67 | 21 / 21 | 100% | 96.24 | 502 / 504 |
adrenal gland | 100% | 9718.30 | 258 / 258 | 100% | 111.92 | 229 / 230 |
liver | 100% | 5301.01 | 225 / 226 | 100% | 58.91 | 405 / 406 |
pancreas | 98% | 4756.80 | 323 / 328 | 99% | 89.29 | 177 / 178 |
adipose | 100% | 9528.99 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 13897.11 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 146.05 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 53.84 | 29 / 29 |
spleen | 100% | 8610.44 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 89.93 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 79.40 | 1 / 1 |
muscle | 100% | 10196.43 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 8402.97 | 844 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 8394.37 | 903 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006897 | Biological process | endocytosis |
GO_0006886 | Biological process | intracellular protein transport |
GO_0007032 | Biological process | endosome organization |
GO_0048227 | Biological process | plasma membrane to endosome transport |
GO_0030100 | Biological process | regulation of endocytosis |
GO_0019882 | Biological process | antigen processing and presentation |
GO_0030667 | Cellular component | secretory granule membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0030139 | Cellular component | endocytic vesicle |
GO_0012505 | Cellular component | endomembrane system |
GO_0016020 | Cellular component | membrane |
GO_0005769 | Cellular component | early endosome |
GO_0031901 | Cellular component | early endosome membrane |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005768 | Cellular component | endosome |
GO_0042470 | Cellular component | melanosome |
GO_0019003 | Molecular function | GDP binding |
GO_0030742 | Molecular function | GTP-dependent protein binding |
GO_0003925 | Molecular function | G protein activity |
GO_0005525 | Molecular function | GTP binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RAB5B |
Protein name | small monomeric GTPase (EC 3.6.5.2) RAB5B, member RAS oncogene family Ras-related protein Rab-5B (EC 3.6.5.2) |
Synonyms | |
Description | FUNCTION: Protein transport. Probably involved in vesicular traffic. . |
Accessions | F8VUA5 P61020 ENST00000551459.5 Q6FI54 ENST00000549505.5 ENST00000549915.5 F8VPW9 ENST00000628569.1 ENST00000548068.5 F8VWZ7 ENST00000360299.10 [P61020-1] ENST00000448789.2 [P61020-2] F8VVZ0 ENST00000553116.5 [P61020-1] |