Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 21% ± 3% | |
GABAergic neuron | 3 studies | 26% ± 4% | |
astrocyte | 3 studies | 18% ± 4% | |
glutamatergic neuron | 3 studies | 34% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 24% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1622.37 | 2642 / 2642 | 100% | 31.68 | 705 / 705 |
esophagus | 100% | 1438.63 | 1445 / 1445 | 100% | 22.03 | 183 / 183 |
lung | 100% | 1668.55 | 578 / 578 | 100% | 23.04 | 1155 / 1155 |
ovary | 100% | 1911.39 | 180 / 180 | 100% | 23.86 | 430 / 430 |
prostate | 100% | 2082.35 | 245 / 245 | 100% | 29.08 | 502 / 502 |
breast | 100% | 1869.06 | 459 / 459 | 100% | 24.61 | 1116 / 1118 |
skin | 100% | 1496.96 | 1809 / 1809 | 100% | 29.09 | 471 / 472 |
thymus | 100% | 2277.96 | 653 / 653 | 100% | 23.43 | 603 / 605 |
kidney | 100% | 1319.81 | 89 / 89 | 100% | 20.26 | 898 / 901 |
adrenal gland | 100% | 1554.44 | 258 / 258 | 100% | 29.90 | 229 / 230 |
bladder | 100% | 1555.71 | 21 / 21 | 99% | 17.13 | 500 / 504 |
stomach | 100% | 1165.62 | 359 / 359 | 99% | 15.14 | 283 / 286 |
uterus | 100% | 1791.19 | 170 / 170 | 99% | 21.08 | 454 / 459 |
intestine | 100% | 1654.50 | 966 / 966 | 99% | 13.66 | 520 / 527 |
pancreas | 100% | 939.79 | 328 / 328 | 98% | 18.49 | 175 / 178 |
liver | 100% | 954.69 | 226 / 226 | 89% | 8.47 | 363 / 406 |
adipose | 100% | 1713.90 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1736.22 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 17.15 | 29 / 29 |
spleen | 100% | 1764.74 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 18.26 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.29 | 1 / 1 |
heart | 100% | 918.92 | 857 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 1086.33 | 924 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 24.39 | 79 / 80 |
muscle | 96% | 471.27 | 770 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051607 | Biological process | defense response to virus |
GO_0015031 | Biological process | protein transport |
GO_0016192 | Biological process | vesicle-mediated transport |
GO_0007030 | Biological process | Golgi organization |
GO_0016236 | Biological process | macroautophagy |
GO_0032481 | Biological process | positive regulation of type I interferon production |
GO_0045921 | Biological process | positive regulation of exocytosis |
GO_0045087 | Biological process | innate immune response |
GO_0000139 | Cellular component | Golgi membrane |
GO_0000421 | Cellular component | autophagosome membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0001669 | Cellular component | acrosomal vesicle |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005886 | Cellular component | plasma membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005525 | Molecular function | GTP binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RAB2B |
Protein name | GTP-binding protein RAB2B RAB2B, member RAS oncogene family Ras-related protein Rab-2B (EC 3.6.5.2) |
Synonyms | |
Description | FUNCTION: The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between active GTP-bound and inactive GDP-bound states. In their active state, drive transport of vesicular carriers from donor organelles to acceptor organelles to regulate the membrane traffic that maintains organelle identity and morphology. Regulates the compacted morphology of the Golgi (Probable). Promotes cytosolic DNA-induced innate immune responses. Regulates IFN responses against DNA viruses by regulating the CGAS-STING signaling axis (By similarity). . |
Accessions | ENST00000649801.1 E9PE37 Q9UL31 A0A3B3ITL1 ENST00000397762.6 [Q8WUD1-1] ENST00000417141.5 Q8WUD1 |