Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 8 studies | 24% ± 4% | |
| epithelial cell | 7 studies | 31% ± 13% | |
| basal cell | 5 studies | 27% ± 10% | |
| ciliated cell | 4 studies | 26% ± 6% | |
| astrocyte | 4 studies | 24% ± 5% | |
| glutamatergic neuron | 4 studies | 40% ± 15% | |
| oligodendrocyte | 4 studies | 22% ± 3% | |
| microglial cell | 3 studies | 21% ± 4% | |
| fibroblast | 3 studies | 18% ± 2% | |
| type I pneumocyte | 3 studies | 18% ± 1% | |
| GABAergic neuron | 3 studies | 37% ± 6% | |
| dendritic cell | 3 studies | 29% ± 18% | |
| pancreatic ductal cell | 3 studies | 33% ± 15% | |
| abnormal cell | 3 studies | 23% ± 6% | |
| macrophage | 3 studies | 21% ± 4% | |
| goblet cell | 3 studies | 28% ± 15% | |
| neuron | 3 studies | 24% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 3288.70 | 2642 / 2642 | 100% | 25.40 | 705 / 705 |
| esophagus | 100% | 3274.85 | 1445 / 1445 | 100% | 30.89 | 183 / 183 |
| intestine | 100% | 2805.69 | 966 / 966 | 100% | 26.81 | 527 / 527 |
| lung | 100% | 2561.19 | 578 / 578 | 100% | 25.13 | 1155 / 1155 |
| ovary | 100% | 2378.60 | 180 / 180 | 100% | 18.31 | 430 / 430 |
| stomach | 100% | 1953.11 | 359 / 359 | 100% | 28.11 | 286 / 286 |
| breast | 100% | 2619.31 | 459 / 459 | 100% | 30.17 | 1117 / 1118 |
| prostate | 100% | 2388.74 | 245 / 245 | 100% | 16.52 | 501 / 502 |
| uterus | 100% | 2725.76 | 170 / 170 | 100% | 24.42 | 458 / 459 |
| kidney | 100% | 2359.29 | 89 / 89 | 100% | 18.86 | 898 / 901 |
| bladder | 100% | 2663.57 | 21 / 21 | 100% | 23.71 | 502 / 504 |
| thymus | 100% | 2997.93 | 653 / 653 | 100% | 21.82 | 602 / 605 |
| adrenal gland | 100% | 4259.78 | 258 / 258 | 99% | 25.88 | 227 / 230 |
| pancreas | 100% | 1346.94 | 327 / 328 | 99% | 23.23 | 176 / 178 |
| skin | 100% | 2927.30 | 1809 / 1809 | 99% | 23.58 | 465 / 472 |
| liver | 100% | 1401.95 | 226 / 226 | 96% | 11.23 | 389 / 406 |
| adipose | 100% | 2786.39 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 3082.13 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 12.96 | 29 / 29 |
| spleen | 100% | 2222.96 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 22.60 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 9.34 | 1 / 1 |
| muscle | 99% | 1169.16 | 792 / 803 | 0% | 0 | 0 / 0 |
| heart | 98% | 1194.75 | 845 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 80% | 7.56 | 64 / 80 |
| peripheral blood | 80% | 1097.04 | 741 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006886 | Biological process | intracellular protein transport |
| GO_0006897 | Biological process | endocytosis |
| GO_0007032 | Biological process | endosome organization |
| GO_0097494 | Biological process | regulation of vesicle size |
| GO_0001726 | Cellular component | ruffle |
| GO_0010008 | Cellular component | endosome membrane |
| GO_0015629 | Cellular component | actin cytoskeleton |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0045335 | Cellular component | phagocytic vesicle |
| GO_0005770 | Cellular component | late endosome |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0030670 | Cellular component | phagocytic vesicle membrane |
| GO_0012505 | Cellular component | endomembrane system |
| GO_0005769 | Cellular component | early endosome |
| GO_0019003 | Molecular function | GDP binding |
| GO_0005525 | Molecular function | GTP binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0003924 | Molecular function | GTPase activity |
| Gene name | RAB22A |
| Protein name | Ras-related protein Rab-22A (Rab-22) |
| Synonyms | RAB22 |
| Description | FUNCTION: Plays a role in endocytosis and intracellular protein transport. Mediates trafficking of TF from early endosomes to recycling endosomes . Required for NGF-mediated endocytosis of NTRK1, and subsequent neurite outgrowth . Binds GTP and GDP and has low GTPase activity. Alternates between a GTP-bound active form and a GDP-bound inactive form . . |
| Accessions | ENST00000244040.4 Q9UL26 |