Name | Number of supported studies | Average coverage | |
---|---|---|---|
mast cell | 24 studies | 35% ± 12% | |
platelet | 9 studies | 50% ± 16% | |
microglial cell | 6 studies | 23% ± 7% | |
brush cell | 5 studies | 68% ± 19% | |
megakaryocyte | 4 studies | 56% ± 17% | |
megakaryocyte-erythroid progenitor cell | 4 studies | 36% ± 10% | |
conventional dendritic cell | 3 studies | 22% ± 1% | |
mesothelial cell | 3 studies | 31% ± 13% |
Insufficient scRNA-seq data for expression of PTGS1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 10557.09 | 1438 / 1445 | 79% | 20.19 | 145 / 183 |
stomach | 93% | 3809.05 | 334 / 359 | 72% | 11.36 | 206 / 286 |
intestine | 96% | 14818.46 | 932 / 966 | 63% | 9.53 | 330 / 527 |
lung | 82% | 2177.45 | 472 / 578 | 74% | 13.30 | 860 / 1155 |
bladder | 95% | 40635.62 | 20 / 21 | 58% | 16.35 | 291 / 504 |
skin | 99% | 17894.65 | 1792 / 1809 | 43% | 7.96 | 203 / 472 |
ovary | 4% | 95.84 | 8 / 180 | 100% | 165.05 | 429 / 430 |
breast | 5% | 101.27 | 23 / 459 | 82% | 14.38 | 920 / 1118 |
prostate | 39% | 4512.44 | 96 / 245 | 46% | 7.15 | 229 / 502 |
kidney | 6% | 144.19 | 5 / 89 | 73% | 30.94 | 662 / 901 |
pancreas | 1% | 21.51 | 2 / 328 | 78% | 12.96 | 139 / 178 |
brain | 3% | 81.14 | 91 / 2642 | 73% | 17.53 | 513 / 705 |
uterus | 9% | 299.16 | 15 / 170 | 63% | 26.39 | 290 / 459 |
tonsil | 0% | 0 | 0 / 0 | 71% | 14.37 | 32 / 45 |
spleen | 67% | 1464.57 | 161 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 62% | 14.37 | 18 / 29 |
peripheral blood | 61% | 2154.54 | 568 / 929 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 0 | 0 / 258 | 47% | 34.71 | 108 / 230 |
thymus | 10% | 205.89 | 65 / 653 | 32% | 3.02 | 193 / 605 |
adipose | 40% | 1371.53 | 481 / 1204 | 0% | 0 | 0 / 0 |
heart | 38% | 1120.04 | 326 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 28% | 709.80 | 369 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 16% | 2.06 | 13 / 80 |
liver | 0% | 31.42 | 1 / 226 | 16% | 2.09 | 64 / 406 |
muscle | 0% | 4.76 | 2 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0019371 | Biological process | cyclooxygenase pathway |
GO_0098869 | Biological process | cellular oxidant detoxification |
GO_0008217 | Biological process | regulation of blood pressure |
GO_0001516 | Biological process | prostaglandin biosynthetic process |
GO_0006979 | Biological process | response to oxidative stress |
GO_0042127 | Biological process | regulation of cell population proliferation |
GO_0001750 | Cellular component | photoreceptor outer segment |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0043005 | Cellular component | neuron projection |
GO_0005737 | Cellular component | cytoplasm |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0004601 | Molecular function | peroxidase activity |
GO_0004666 | Molecular function | prostaglandin-endoperoxide synthase activity |
GO_0020037 | Molecular function | heme binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0016702 | Molecular function | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
Gene name | PTGS1 |
Protein name | Prostaglandin G/H synthase 1 (EC 1.14.99.1) (Cyclooxygenase-1) (COX-1) (Prostaglandin H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1) (Prostaglandin-endoperoxide synthase 1) Prostaglandin G/H synthase 1 (EC 1.14.99.1) (Cyclooxygenase-1) (Prostaglandin H2 synthase 1) (Prostaglandin-endoperoxide synthase 1) Prostaglandin-endoperoxide synthase 1 Cyclooxygenase-1 (EC 1.14.99.1) |
Synonyms | COX1 |
Description | FUNCTION: Dual cyclooxygenase and peroxidase that plays an important role in the biosynthesis pathway of prostanoids, a class of C20 oxylipins mainly derived from arachidonate ((5Z,8Z,11Z,14Z)-eicosatetraenoate, AA, C20:4(n-6)), with a particular role in the inflammatory response. The cyclooxygenase activity oxygenates AA to the hydroperoxy endoperoxide prostaglandin G2 (PGG2), and the peroxidase activity reduces PGG2 to the hydroxy endoperoxide prostaglandin H2 (PGH2), the precursor of all 2-series prostaglandins and thromboxanes. This complex transformation is initiated by abstraction of hydrogen at carbon 13 (with S-stereochemistry), followed by insertion of molecular O2 to form the endoperoxide bridge between carbon 9 and 11 that defines prostaglandins. The insertion of a second molecule of O2 (bis-oxygenase activity) yields a hydroperoxy group in PGG2 that is then reduced to PGH2 by two electrons . Involved in the constitutive production of prostanoids in particular in the stomach and platelets. In gastric epithelial cells, it is a key step in the generation of prostaglandins, such as prostaglandin E2 (PGE2), which plays an important role in cytoprotection. In platelets, it is involved in the generation of thromboxane A2 (TXA2), which promotes platelet activation and aggregation, vasoconstriction and proliferation of vascular smooth muscle cells (Probable). Can also use linoleate (LA, (9Z,12Z)-octadecadienoate, C18:2(n-6)) as substrate and produce hydroxyoctadecadienoates (HODEs) in a regio- and stereospecific manner, being (9R)-HODE ((9R)-hydroxy-(10E,12Z)-octadecadienoate) and (13S)-HODE ((13S)-hydroxy-(9Z,11E)-octadecadienoate) its major products (By similarity). . |
Accessions | ENST00000362012.7 [P23219-1] ENST00000223423.8 [P23219-2] A0A2R8YDM0 ENST00000643810.1 ENST00000647067.1 X6RJD6 ENST00000426608.6 A0A2R8Y6S0 ENST00000373698.7 [P23219-4] ENST00000619306.5 ENST00000540753.6 [P23219-3] A0A087X296 Q6LCE7 P23219 |