PSD2 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
astrocyte	13 studies	42% ± 20%	Explore
glutamatergic neuron	4 studies	23% ± 7%	Explore
oligodendrocyte precursor cell	4 studies	35% ± 10%	Explore
neuron	3 studies	21% ± 2%	Explore
GABAergic neuron	3 studies	25% ± 4%	Explore
ependymal cell	3 studies	32% ± 18%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	21% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	8750.06	2639 / 2642	100%	132.84	702 / 705
adrenal gland	0%	2.92	1 / 258	36%	0.89	82 / 230
ovary	0%	0	0 / 180	31%	1.00	134 / 430
skin	0%	0	0 / 1809	31%	1.14	147 / 472
thymus	0%	0	0 / 653	29%	1.61	176 / 605
eye	0%	0	0 / 0	24%	0.91	19 / 80
kidney	0%	0	0 / 89	20%	0.43	184 / 901
bladder	0%	0	0 / 21	13%	0.53	68 / 504
uterus	0%	0	0 / 170	13%	0.35	60 / 459
breast	0%	1.38	1 / 459	9%	0.26	97 / 1118
pancreas	0%	0	0 / 328	5%	0.16	9 / 178
lung	0%	0	0 / 578	5%	0.17	53 / 1155
tonsil	0%	0	0 / 0	4%	0.06	2 / 45
intestine	0%	0.95	1 / 966	4%	0.07	21 / 527
esophagus	0%	0	0 / 1445	4%	0.10	7 / 183
stomach	0%	0	0 / 359	3%	0.08	10 / 286
liver	0%	0	0 / 226	2%	0.05	7 / 406
muscle	1%	10.34	7 / 803	0%	0	0 / 0
prostate	0%	0	0 / 245	1%	0.02	3 / 502
blood vessel	0%	0.65	1 / 1335	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
adipose	0%	0	0 / 1204	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
heart	0%	0	0 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1